Cannabis sativa (hemp): 115711463
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Entry
115711463 CDS
T08987
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115711463
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115711463
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Trypan_PARP
Pect-lyase_RHGA_epim
Beta_helix
FAM75
Motif
Other DBs
NCBI-GeneID:
115711463
NCBI-ProteinID:
XP_030495665
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Position
3:42282923..42285086
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AA seq
469 aa
AA seq
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MENVHFTYYKNQGHTKAVCQNVEFTRFRDVIPSCDSDTIDHQKPQPQTQPKPQPKPQPKP
QPKPQPQPQPKPQPKPQPKPKPRSHPMPRPVPVQKRGVINVDDFGAKGRGQDDTMAFEKA
WQKACSSNVPIVLVVPSQNTYLVKPIVFRGPCKSKVTVQIDGTIEAPSDPSDYNGHESNW
LMFENINDLVVQGGGTINGNGNSWWKLSCNIDTSLPCKPAPTGLTFSNCNNLVVRDLHVK
DCQQMQVMFVNCNTVMAFNLTVTAPGDSPNTDGIHVTRCVNMDISNSVIGTGDDCISIVS
GSRNVTATDITCGPGHGISIGSLGAGHAEAHVSDIFVRRAKFYETTNGVRIKTWQGGKGD
ARNIKFQDIEMHNVQNPIIIDQNYCDRRRMVCKQEESTVQVSDVLYQNIKGTSASQVAIM
FDCSQSHECENIILQDVELQLPQHRAHAEALCNNVDLTHIGRVTPLCPN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgttcacttcacatactataaaaaccaaggccataccaaagctgtgtgccaa
aatgtggaattcactcgttttagagatgttattccaagctgtgattctgataccattgac
caccaaaagcctcagccacagacacagccaaagcctcaaccgaagcctcaacctaagcct
cagccaaagcctcaacctcaacctcaaccgaagcctcagccaaagcctcagcctaagcct
aagcctcgatctcacccaatgccaaggcctgtgccagttcaaaaacgaggagttattaat
gttgatgattttggagcaaaaggaaggggccaagatgacacgatggcatttgagaaggca
tggcagaaggcttgttcatctaatgttcctattgtactagtggtgccttctcaaaacacc
tatcttgttaagccaattgtgttccgcggtccatgcaaatccaaagttacagttcagatt
gatgggactatagaagcaccctccgatccatcagactacaatggacacgaaagcaactgg
cttatgtttgaaaatattaatgatttagtagtccaaggtggtggaaccattaacggtaat
ggaaattcttggtggaagctctcctgcaacattgatacatcactcccatgcaagccagca
ccaaccggtttaactttttcaaattgtaacaacttggtggtgagagatttacatgtaaaa
gactgccaacaaatgcaagtcatgtttgtgaattgcaacacagtcatggctttcaatctc
acagtcactgcaccaggcgatagtcccaacactgatggaatccatgtaacacgttgtgtg
aacatggacatctctaactctgtcattggaacaggtgatgattgcatatctatcgtaagc
ggatcccgaaatgttacagccacagacataacctgtggacctggtcacggaatcagtatt
ggaagtttgggagctggacatgcagaagctcatgtttctgatatattcgtccgcagagct
aaattttacgaaaccactaatggagttcgaattaaaacttggcagggaggtaaaggagat
gcgagaaatataaaatttcaagacatagagatgcataatgtgcagaacccaatcataatc
gatcaaaattattgtgatcgtcgtagaatggtctgcaaacaagaggaatctactgttcaa
gtgagtgatgtgttgtaccaaaacattaaaggtacaagtgcctctcaagttgccataatg
ttcgattgtagtcagagtcatgaatgtgaaaatattatattacaagatgtcgagctacaa
ctaccccaacatagagcacatgctgaagctttgtgcaacaatgtggacctcactcatatt
ggacgtgttactcctctgtgtccaaattag
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