Cannabis sativa (hemp): 115712126
Help
Entry
115712126 CDS
T08987
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115712126
09123 Folding, sorting and degradation
03018 RNA degradation
115712126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115712126
03041 Spliceosome [BR:
csav03041
]
115712126
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115712126
mRNA degradation factors
5'-3' decay
Lsm complex
115712126
Spliceosome [BR:
csav03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115712126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7452
Ntox4
Motif
Other DBs
NCBI-GeneID:
115712126
NCBI-ProteinID:
XP_030496220
LinkDB
All DBs
Position
4:80329669..80331971
Genome browser
AA seq
87 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITTEGR
RITKLDQILLNGNNIAILVPGGSPEPE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatccctcccagctacttccttcagagttaatcgaccgttgcatagggtct
aaaatttgggtcataatgaagggcgacaaggagcttgttggtactcttcgcggcttcgat
gtttacgtcaacatggttcttgaagacgtcactgaatacgagatcactaccgaaggaaga
cggataaccaagcttgatcagattttgctgaatgggaacaacattgcaattctggttcca
ggtggctcaccagaacctgaatga
DBGET
integrated database retrieval system