KEGG   Cannabis sativa (hemp): 115712126
Entry
115712126         CDS       T08987                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03018  RNA degradation
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115712126
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115712126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csav03019]
    115712126
   03041 Spliceosome [BR:csav03041]
    115712126
Messenger RNA biogenesis [BR:csav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115712126
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     115712126
Spliceosome [BR:csav03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    115712126
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 115712126
NCBI-ProteinID: XP_030496220
LinkDB
Position
4:80329669..80331971
AA seq 87 aa
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITTEGR
RITKLDQILLNGNNIAILVPGGSPEPE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggccaacaatccctcccagctacttccttcagagttaatcgaccgttgcatagggtct
aaaatttgggtcataatgaagggcgacaaggagcttgttggtactcttcgcggcttcgat
gtttacgtcaacatggttcttgaagacgtcactgaatacgagatcactaccgaaggaaga
cggataaccaagcttgatcagattttgctgaatgggaacaacattgcaattctggttcca
ggtggctcaccagaacctgaatga

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