Cannabis sativa (hemp): 115712176
Help
Entry
115712176 CDS
T08987
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115712176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
YfjL_C
Motif
Other DBs
NCBI-GeneID:
115712176
NCBI-ProteinID:
XP_030496286
LinkDB
All DBs
Position
4:complement(13190330..13192990)
Genome browser
AA seq
600 aa
AA seq
DB search
MLPMFDPNDNEAGMKLLEDLTTNAHHFQQQALKEILSNNAATEYLSSFLNGHSDMKLFKE
RVPIVKYEDIKPFINRIANGESSNIISAQPITELLTSSGTSGGQPKMMPSTHEELERKTF
FYNLLVPIMNKYVGGLDQGKAMYLLFVKPEVSTPSGLRARPVLTSYYKSDNFRKRPFNRY
NVYTSPDETILCDDTKQSMYCQLLCGLLERDHVLRVGAVFASAFLRAIKFLEDHWEELCC
NIRSAQLSQWISDPTCRNAVSSLMLKPNPELADLIETQCRERSWEGIIKRVWPKTKFIEV
IVTGSMAQYISTLEFYGRGLPLVSTMYASSECFFGINFKPLSKPCDVSYTLIPTMAYFEF
LPVVAPADNNDRKDSITGCSNKEQVVVDLVDVKLGHYYELVVTTFTGLYRYRVGDILRVS
GFHNKAPQFRFVQRRNVVLSIDADKTNEEDLLQAVGKAKEVVEAVGFLVTEYSSYADTSS
IPGHYVLFWELKSKSGGAYSELELNQDVMEECCWRVEESLDSVYRRCRAKDKSIGALEIR
VVKEGSFDALMDFCVSQGSSLNQYKTPRCIKYEAGIIILESRVVARFFSQKLPSWEPPCF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccatgtttgatccaaacgacaatgaagctggtatgaagcttttggaggaccta
accacaaatgcacaccattttcaacaacaggcactgaaggagatactatcaaacaatgct
gccactgaatatctaagcagctttctcaatggtcactctgatatgaagcttttcaaggaa
agagttcccattgtgaagtatgaagatatcaagccttttatcaaccgaattgccaatggg
gaatcctccaacatcatttcagctcaaccaataacagagcttcttacgagctcaggaact
tcaggagggcaaccaaagatgatgccttcaacgcatgaagaattggagaggaagacattt
ttctataaccttcttgtgcccatcatgaacaaatatgtgggagggctggaccaaggaaaa
gccatgtatcttctgtttgtgaaaccagaagtgagtaccccatctggcttgagggcgagg
cctgtgctgacaagctattacaagagtgataacttcagaaaaaggccattcaaccgttac
aatgtctacacaagccccgatgagacaatcttatgtgatgacacaaagcaaagcatgtac
tgccaattactctgcggtttactcgaacgagaccatgttctcagagttggagcagttttc
gcctctgcttttctcagagccattaagttcttggaggatcattgggaagagttatgctgc
aacataagatctgcccagttgagccaatggatctctgatccaacttgtaggaatgccgtg
tcatcattaatgctcaaaccaaatccagaactggctgacttgatcgaaacccaatgcagg
gagaggtcatgggaaggtatcatcaaaagggtttggcccaaaaccaagtttattgaagtt
attgtcacagggtccatggctcaatacatctcgaccctggaattctacggtagaggcctt
cctttggtatcgaccatgtacgcttcctccgaatgtttcttcggcattaacttcaaacca
ctaagcaagccatgtgatgtctcttacactctcattcccaccatggcttacttcgagttc
ttaccagtagtagcaccagcagacaataatgaccgtaaagatagtattactggttgttct
aataaagaacaagtagtagtggacctagtagatgtgaagctcggtcactactatgaactc
gtagtaaccactttcacaggcttgtatagatacagagtgggtgacattctaagagtgagt
ggctttcacaacaaagcacctcagttcagatttgtgcagcgtagaaacgtggtgttaagc
attgacgcagataaaactaatgaagaggatctgttacaggcagttgggaaagcaaaagag
gtggttgaagcagttgggttcttagtgacagagtacagtagctacgctgacacgtcatca
atcccaggccattacgtgctattttgggagcttaagagcaaatcaggaggagcatattca
gaattggagctgaatcaagatgtaatggaggaatgttgttggagggtagaagagtcattg
gactctgtttacagaagatgtagagctaaggacaagtccattggagcattggagataagg
gttgtgaaggaaggaagctttgatgctttaatggatttttgtgtttcacaaggatcttct
ctgaaccagtacaaaacacccagatgtattaaatacgaggcagggataataattttggag
tcaagagttgtggcaagatttttcagtcaaaaattaccatcatgggagcctccttgcttt
tag
DBGET
integrated database retrieval system
