Cannabis sativa (hemp): 115712320
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Entry
115712320 CDS
T08987
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115712320
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
115712320
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
ADNP_N
Motif
Other DBs
NCBI-GeneID:
115712320
NCBI-ProteinID:
XP_030496442
UniProt:
A0A803PHM4
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Position
4:684923..687603
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AA seq
395 aa
AA seq
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MSPILSLCGIVNLFIILASHGKAQVFDITKKGATTSSSDISKSLLEAWNGACASSTPSKV
LVPKGTFQLSAAMLQGPCKAPINFDLEGTLQAPGLGSSYSSGNNWIVFAYVDQLTISGTG
TFDGRGPTAWGKKCDWNEFCGSLPINLRFNFVTNSIIEDITSKDSKQFHVNLIGCKNMTF
QHFHVLAPEKSLNTDGIHIGKSSNIKITNTTIETGDDCISIGDGSNQITITNVTCGPGHG
ISIGSLGKYKDEEPVKGVYVKSCTLKNTQNGVRIKTWPDSKPGAASDLHFEDITMENVGN
PVLIDQEYCPFNGCKAKLPSNVKISNVSFKRIRGTSSTPLAIKLVCSGGMPCQNVVVSDI
NLKYNGTQGSMSSECKNVKPAVSGTLNPPICSITH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaattttaagcttatgtggaatagttaatctattcataattttggcatctcat
ggcaaggcccaagtttttgatatcacaaaaaaaggtgcaacaactagtagttcagatatt
tccaagagtttgttagaggcttggaatggagcttgtgcatcatcaacaccgagtaaagtg
ttggtgccgaaagggacattccaattaagcgcagcaatgctacaaggaccctgcaaggct
cctattaatttcgatttggaaggcacattgcaggcacctggattgggctctagttacagt
tctggcaacaattggatcgtttttgcttatgtcgaccaactcactatctccggtactggc
actttcgacggtcgaggccccaccgcttggggtaaaaaatgtgattggaatgagttctgc
ggtagccttcccattaatttaaggttcaactttgtgaccaactccataatcgaagacatt
acaagcaaagacagcaaacagtttcatgtgaaccttattgggtgcaagaacatgaccttc
caacacttccatgtcctggcacccgaaaagagcctcaacaccgatggaatccacattgga
aaatcaagcaacatcaagatcaccaacaccacaatcgaaactggagatgattgcatctct
attggggatggaagcaaccaaatcacaatcactaatgtcacatgcggacctggccacggc
atcagcatcggtagtttaggaaagtacaaagatgaggagcctgtcaaaggtgtttacgtc
aagagttgcacattaaagaacacacaaaatggggttcgaatcaaaacttggcctgattcc
aaaccaggagcagcatcagacctacattttgaagacattacaatggagaatgttggcaac
ccagtgttgattgaccaagaatattgtccctttaatggttgcaaggccaaacttccttcc
aatgttaaaatcagtaatgtaagttttaagagaataaggggtacttcttctacaccatta
gctataaaattggtgtgtagtggtggaatgccttgccagaacgtcgtcgtttctgacatt
aatttgaagtataatgggactcaagggtcaatgtcttctgagtgcaaaaatgtcaaacct
gccgtgagtggaactctcaacccgccaatatgctctatcacccattag
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