Cannabis sativa (hemp): 115712618
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Entry
115712618 CDS
T08987
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03030
DNA replication
csav03410
Base excision repair
csav03420
Nucleotide excision repair
csav03430
Mismatch repair
csav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115712618
03410 Base excision repair
115712618
03420 Nucleotide excision repair
115712618
03430 Mismatch repair
115712618
03440 Homologous recombination
115712618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115712618
03400 DNA repair and recombination proteins [BR:
csav03400
]
115712618
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115712618
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
115712618
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
115712618
MMR (mismatch excision repair)
DNA polymerase delta complex
115712618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
115712618
NCBI-ProteinID:
XP_030496781
LinkDB
All DBs
Position
4:complement(49473129..49489405)
Genome browser
AA seq
1087 aa
AA seq
DB search
MNKGGSRKRPPPPPQISPANPPKQQATSQEEEFLDEDVFLDETLIEDEDSLILRDLEDRQ
ALASRLSKWVRPSLSDDYVSGSRNVVFQQLEIDYVIGESHKSLLPNSSGPAAIIRIFGVT
KEGHSVCCNVHGFEPYFYISCPSGMRPDDISNFHQILEGRMKEANRNSKVPKFIRRIEMV
QKKSIMYYQQQHSYPFLKIVVALPTMVTSCRGILDRGVQIDGLGMKSFMTYESNVLFALR
FMIDCNIVGGNWIEVPGGKYMKTAKKLSYCQLEFDCIYSELISHVPEGEYSKMAPFRILS
FDIECAGRKGHFPEPGHDPVIQIANLLTLQGNTEPLVRNVMTLKSCSPIVGVDVMSFDTE
REVLLAWRDFINLVDPDIIIGYNICKFDLPYLIERAETLGIAEFPILGRIRSSRVRVKDT
TFSSRQYGTRESKEVSIEGRVQFDLLQIMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSII
SDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIK
VLSQLLRKAKQKNLVIPNAKHAGSEQGTYEGATVLEAKSGFYEKPIATLDFASLYPSIMM
AYNLCYCTLVTPEDARKFNLPPECVNKTPSGETFVKSSLQKGILPEILEELLTARKRAKA
DLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTK
KHVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVASVEEAMNLGREAADFISGTFIKPIKL
EFEKVYYPYLLISKKRYAGLFWTNPDKFDKMDTKGIETVRRDNCLLVKNLVNECLHKILI
DRDVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAERMRKRDAA
TAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFDPI
LKNASKELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALLGKTDQTLCSHCKGREA
ELYCKSVSNVSELETLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKQ
QLDRWTF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggcggaagcagaaagcgaccacctccaccaccgcagatttcaccggcgaac
cctcccaagcagcaggcaacctcgcaagaggaggaatttctcgacgaagatgtcttcctt
gatgaaaccctcatcgaggatgaagactccctcatcctccgagaccttgaggaccgccag
gcacttgcttcccgcctatccaagtgggttcgcccctctctttccgatgattacgtctcc
ggctcgcgaaatgttgtatttcagcagttggagatagattatgtgatcggggagagccat
aaatcattacttccgaattcttcaggacctgccgccattatcagaatattcggtgtcaca
aaggaaggacatagtgtgtgctgtaatgttcatggctttgagccatacttctacatcagc
tgcccttcaggaatgagacctgacgacatatccaactttcatcaaattttggagggaagg
atgaaggaggctaataggaacagcaaggtacctaagttcattcgtcgtattgagatggtc
cagaaaaagagcataatgtactaccagcagcagcattcttacccttttctcaaaattgtt
gttgctctaccgacaatggttacaagctgtcgtggcatacttgacagaggtgtacaaatt
gatggactgggtatgaagagcttcatgacatatgaaagcaatgttctatttgctcttcgc
tttatgattgattgcaacatagttggtggcaactggattgaagtacctggtggaaaatat
atgaagacagctaaaaagttgtcgtactgtcagttagagtttgattgcatatattcagaa
cttatcagtcatgtgccagaaggagaatattcaaagatggctccatttcgcatactgagt
tttgacattgaatgtgctggtcgtaaaggtcattttcccgagcctggccatgatcctgtt
atccagattgcaaatctgttaacattacagggaaatactgagccattagtccgtaatgtc
atgacccttaagtcatgttctccaattgttggtgtcgacgtgatgtcctttgatacagaa
agagaagtcttgctagcttggagggattttattaatctagtggaccctgacatcattatt
ggatataacatttgcaaatttgatttgccatatctcattgaaagagctgagactttggga
atagctgaatttccaatactgggtcgcatcagaagcagcagggttcgggtcaaagatact
accttctcttcaagacagtatggtacccgggagagtaaagaagtatcaattgaagggaga
gttcaatttgacttgctacagattatgcaacgagattataaattgagttcatactccttg
aattctgtctcagcacacttcctttctgagcagaaagaggatgttcaccattcaattata
tctgatctccagaatgggaatgctgaaaccagaaggcgacttgcagtatattgtctgaag
gatgcttatcttcctcagcgactattggacaaactgatgttcatttacaattatgtggag
atggctagagttacaggagttcccatttcttttcttctctccaggggtcaaagcataaag
gtactttctcaacttctgaggaaggcaaaacaaaagaatcttgtaattccaaatgccaaa
cacgcaggatctgaacaagggacatatgaaggtgccactgttttggaggcaaagtcaggg
ttttatgaaaagccaattgcaacattggattttgcatccttgtacccgtcaatcatgatg
gcatataatctgtgctactgtactctggttacaccggaagatgctcgcaaattcaacctc
cctccagaatgtgttaacaaaactccatctggtgaaacatttgttaaatcaagtttgcag
aagggaatacttcctgaaattcttgaagaattattaactgctcgtaaaagagcgaaggcc
gatttgaaggaagcaaaggatcctcttgagaaagcggtgctggatggtcggcagttagca
ttaaaaataagtgcaaactctgtttatggatttactggagctaccgttggtcagttacct
tgtttagagatatcttcaagtgtcacaagctatggtcgacaaatgattgagcatacaaaa
aaacatgtagaagataaatttactacacttgggggatatgaacacaatgctgaggtcata
tacggagacacagattcagttatggtccagtttggtgtggcctctgtggaagaagcaatg
aacttagggagagaagctgctgattttattagtggaactttcattaaacctatcaagtta
gagtttgagaaggtttattatccatatcttctgatcagcaagaagagatatgctggtctg
ttttggacaaacccagacaagtttgacaaaatggataccaaaggtattgaaactgttcga
agagacaattgtttattggtaaagaacttggtaaatgagtgcttgcacaaaatactaatt
gacagggacgttcctggagcagtccaatatgtcaagaacaccatttcagatcttcttatg
aaccgtatggatttgtcacttctggttataactaagggtttaacaaagactggagatgat
tatgaagtaaagactgctcatgttgaacttgctgaacgcatgcgtaagagagatgctgcc
actgctccaaatgttggagatcgagtaccatatgtcattatcaaagcagcaaaaggtgcc
aaggcgtatgaaaagtcagaggatcccatctatgttttggagaataacataccaatagac
cctcagtactatcttgaaaatcaaattagtaagccacttctaagaatttttgatcccatt
ttaaagaatgccagcaaggagcttctccatggaagtcataccagatcaatctccatctct
acgccctcaaacagtggcataatgaaatttgccaagaagcaacttagttgcataggctgc
aaagctctacttggtaagacagatcaaactctctgctcgcactgtaagggaagggaggct
gaactatattgcaaatcagtgtcaaatgtttctgagctagagacgctttttgggagactt
tggacacaatgccaagagtgccaaggctcattgcatcaggatgtgctctgcacgagtcga
gattgtcctatattttatcgaagaaagaaggcacaaaaagacatggctgaagccaagcaa
caactagatcgttggaccttttga
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integrated database retrieval system
