Cannabis sativa (hemp): 115712688
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Entry
115712688 CDS
T08987
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115712688
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115712688
Enzymes [BR:
csav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115712688
Protein phosphatases and associated proteins [BR:
csav01009
]
HAD phosphatases
Fcp/Scp phosphatases
115712688
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115712688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
RHG29_45_N
Motif
Other DBs
NCBI-GeneID:
115712688
NCBI-ProteinID:
XP_030496877
LinkDB
All DBs
Position
4:complement(10199494..10205721)
Genome browser
AA seq
1310 aa
AA seq
DB search
MVDFGSKSVEWIKIKEIEGFLSEMGKIEDVEEGEISDSASVEEISEEDFKKQEAGGDGGG
AAAVPVDLNLKESKTKGGGGGESARGWTMRDLFQYQGYKGFNNTGLYNLAWAQAVQNKSL
DDIFVMDVDSDQNSKLSSSTPAEKNNVKEVDKVVIDDSDDDMEKEEGELEEGEIDLEESN
PAQESKDGAVLNCDATQINDLVTIDSMHNELEKRINLIREDLESVNVTNTEKSFEQACSR
LHNTLESLREVLSKYSSPAKDVIIDISFTAIQIVNSVFCSMDQNKKDHNKDTLSRLLCFV
KNSDPPVVSPKWMKEIELMAASDKLKEREIVNGVQEIDFKNTSDNTKNAIYGLTTSELPS
DVNCKTVSSDVTSVAHANPITSLEMRSGGVSAFKSRGLLVPLLDLHKDHDEDSLPSPTRE
APTTFSVLKSLGVGDVVVKPGPATSKMTLGTDDSRIRRYETDAVKAVSTYQQKFGGSSFL
MSDRLPSPTPSEDGNEENDDTNMEVTSSVSGSSLRNTSMPMLRPSEVSSYTAVSSSSMQG
PIVAKNALSASSASSSSMKAFAKSRDPRLRFANSDSGALDLNQRPVAAVRNAPKVEYVEP
TSSRKQKVADEAHLDGSSFKRQRNSFKNAGTVGDVKSVSGLGGWIEDNGFIGPQFANKSQ
STEGAEVDPRKSYMGNDHATNGPNMAKELVPVTSTSTTTSLPDLLKDIVVNPTMLLNIIK
LGQQQQQQQQQLLVSETQLKPDHVQNNIHSSSPNSILGVAPLVNLASSKTGILQTPAASL
SVTSQVAPMSPHEDLGKIRMKPRDPRRVLHGISLQKNGSLGNEQLKTTIPSVSNNPGNKD
NSNSQMQEGRADQKAVSSQSAERPDIAGQFTKNLRNIADLLSVSNASTSPVIVSQSLTSQ
PVSVKPEKRDVKDVSTKSEDQGSGISTSETTAVAAPSRATLEAAAVAGSSRAPNTWGDVE
HLFEGYDDKQKAAIQRERTRRLDEQKKMFEARKLCLVLDLDHTLLNSAKFVEVDPVHEEI
LRKKEEQDREKPYRHLFRFPHMGMWTKLRPGVWNFLEKASKLYEMHLYTMGNKLYATEMA
KVLDPKGLLFAGRVISRGDDGEFIDGDERVPRSKDLEGVLGMESSVVIIDDSVRVWPHNK
LNLIAVERYTFFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLGVIERIHQNFFSHHSL
DEADVRNILASEQRKILSGCRIVFSRVFPVSEVNPHLHPLWQTAEQFGAVCTTQIDDQVT
HVVANSPGTDKVNWAISNGRFAVHPGWVEASALLYRRANEQDFAIKPSPT
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttggatctaaatccgtcgagtggattaaaattaaagagattgaaggtttt
ttaagtgaaatggggaaaatagaagatgtagaagaaggtgaaatttcagattcagcctct
gtggaagagatcagtgaagaagatttcaaaaagcaagaggctggtggtgatggtggtggt
gctgctgcagttccggttgatttgaatcttaaagaatcgaaaactaaaggaggtggtggt
ggtgagagtgctaggggttggacgatgcgtgatctgtttcaataccagggatataagggg
tttaataatacgggtttgtataatcttgcctgggcacaggccgttcagaacaaaagtctc
gatgatatttttgtaatggatgttgattctgaccaaaactctaaactatcatcgtctacg
ccggcggaaaagaataatgtcaaagaagtggataaagttgtgattgatgatagtgatgac
gatatggagaaggaagaaggggaactagaggagggtgagattgatttggaggagtcgaac
cctgctcaagaatccaaagatggtgctgtattgaactgtgatgctacccaaattaatgac
ttagtgactattgattccatgcacaatgagttggagaagcgaataaacttgattcgggaa
gatctggagagtgttaatgtgactaatactgagaaatcatttgagcaggcttgctcccgg
ctgcataacactttggagagcttaagagaagttctttcaaagtacagttctccagctaag
gatgttattattgacatttcgttcactgctattcaaattgtcaactctgttttttgttct
atggaccagaacaaaaaagatcataataaggacactttatctaggttactttgttttgta
aagaactctgatcctcctgtcgtctccccgaaatggatgaaggagatagagctcatggca
gcaagtgataaactgaaagagcgagagattgttaacggggttcaggaaatagatttcaag
aatacaagtgataatactaaaaatgccatttatggattgacaacttctgagctgccttct
gatgttaattgtaagactgtcagttctgatgttacttctgtggcccatgctaacccgatt
acctccctggaaatgagatcaggaggagtatctgcatttaagagcaggggccttcttgtt
cccctcttagatcttcacaaggatcacgatgaagatagtcttccttcgcctactcgagag
gcaccaactaccttttcagtccttaaatcattgggtgttggggatgtagttgttaaacct
gggcctgctacatctaaaatgactctagggaccgatgattctagaattcgccgttatgaa
actgatgctgtcaaagctgtttctacttatcaacaaaagtttggtgggagctcctttcta
atgagtgacaggcttccaagcccaaccccttcagaagatggcaatgaggagaatgatgat
actaatatggaggtcacgagctctgtatctggtagtagtttaagaaatacaagtatgccg
atgttgagaccttcagaggtctcttcttatactgctgtgagtagttccagcatgcaagga
ccaattgttgctaaaaatgctctatctgcaagttctgcttctagttcaagcatgaaagcc
tttgcaaagagtagagatcctaggcttcgatttgcaaattcagattcgggtgctttggat
ctcaatcaaagacctgtggctgcagtgcgtaatgcacctaaagtcgaatatgttgaacca
acaagctcaagaaagcaaaaggttgcggatgaggcacatttggatggttcttcattcaaa
aggcaaagaaattcatttaagaatgctggaactgttggtgatgttaaaagtgtgtctgga
ctagggggctggatagaagacaatggtttcataggtccacagttcgcaaataaaagtcag
tcaacagagggtgctgaagtcgatcctagaaaatcatatatggggaatgatcatgcaacg
aatggcccaaatatggctaaagagctggtgccagttacaagtacgagtactacaacttct
ttacccgacttactgaaggatatagttgttaatccgacaatgttactcaacattattaaa
cttgggcaacagcaacagcaacagcaacaacagctattagtatcagaaactcagctcaaa
ccagatcatgtacaaaataatattcattcttcgagcccaaattcaatcctgggagtagct
cctttagtgaaccttgcttcttctaagactgggattttgcagacaccagcggcatcactt
tcagttacttcacaagtagctccaatgagcccgcatgaagatttgggaaaaatccgtatg
aaacccagagacccacgtcgtgttctccatggcatttcacttcagaaaaatgggagcctg
gggaatgaacaactaaaaactactattccctcagtgtcaaataatccaggaaataaggac
aattcaaatagccaaatgcaggagggtcgagctgatcagaaggcagtctcctctcaatca
gctgaacgccctgatattgctggacaatttaccaagaatctcagaaatattgctgatctc
ctgtcagtgtcaaatgcatctacaagtccggttattgtttctcagagtctcacttcgcaa
ccagtgtcagtcaaaccagaaaaaagggatgtgaaagatgtttctacgaagagtgaggat
caggggagtggcatttcaacttctgaaacaacagctgtggcagctccctctcgtgcaact
cttgaagcagcagctgtggcaggttcttctcgtgcacctaacacgtggggagatgttgaa
catctatttgaaggatatgatgacaagcaaaaagctgcaatccagagagagaggactaga
agattagacgaacagaagaagatgtttgaggcccgcaagctgtgccttgtcttggattta
gatcacactcttcttaattcagccaagtttgtggaagtagatccagtgcatgaggagatt
ttgagaaagaaagaggaacaagatcgtgaaaaaccatatagacatttgtttcgtttccct
catatgggaatgtggaccaaactgaggcccggggtctggaattttttagaaaaggccagt
aagctatatgagatgcatctttacaccatggggaacaaactatatgctacagagatggca
aaagtgcttgacccaaaggggctcttatttgctggacgagttatttctaggggtgatgat
ggggaatttatagatggtgatgagagggttccaagaagtaaagatttggaaggagttttg
ggtatggaatcttctgttgtaattattgatgattctgtgagggtctggccgcataacaaa
ttaaacttgatagctgtagaaaggtatacattctttccctgtagtagacgccaattcggt
cttccaggtccttctcttttggagattgaccatgatgaaagaccagaagatggaacacta
gcgtcctctttgggggttattgagagaatccatcagaatttttttagccatcactcacta
gatgaagcagatgttagaaatattctagcatcagagcagcgaaagattttgtctggctgc
cgaatagtatttagtagagtgtttcctgttagtgaggttaatcctcacttacatcctttg
tggcaaactgctgagcagttcggtgcggtatgcactacgcagatagatgaccaggttacc
catgtagtggccaattctcccgggactgataaggtgaattgggctatatctaatggaaga
tttgccgtccatcctggctgggtagaggcatcggctttgctttatcggagagcaaatgag
caagactttgccattaaaccatcaccaacctaa
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