Cannabis sativa (hemp): 115712749
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Entry
115712749 CDS
T08987
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115712749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115712749
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115712749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
115712749
NCBI-ProteinID:
XP_030496960
LinkDB
All DBs
Position
4:complement(3008312..3016442)
Genome browser
AA seq
1485 aa
AA seq
DB search
MSREDELVLRDVTSAGIVVGDRIGREIASHLDLEEALEASRYSSHPYSTHPKEWPPLVEV
VDTWELPPVLVERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
EQAICAVGLAKSKPGVFIEAIQYLLVLATPVELILVGVCCSGGGDCTDPYAEVSLQPLPE
YTVPSDGVTMTCITCTKAGRIFLAGRDGHIYELHYSTGSSWQKRCRKVCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVVDNERSMLYARTEEMKLQVFILGSNGDGALKKVAEERNVIS
QRDTHYGGRQSSGQRAPNRSAKPSIVSISPLTTVESKGLHLVAVLSDGRRIYLTTSLSSG
NLGGFNMNHHKPTCLKVVTTRPSPPLGVSSGLAFGALSLSSRPQNEDLSLKVETSYYSAG
TLVLSDSSPPTMSSLLVVSRDSSAQTSVSTTLGTSSRSNRALREYVSSLSVEGRMLFVAD
VLPMPDAAKTVHSLYSEIEYSGFETLCESSEKACAKLWARGDLSTQHILPRRRLVIFSTM
GMMEIVFNRPVDILRRLFESNSPRSILEDFFNRFGAGEAAAMCLILAARIVYSENLISNT
VAEKAAEAFEDPRVVGMPQLEGSSALSSTRTAAGGFSMGQVVQEAEPVFSGAYEGLCLCS
SRLLFPVWELPVMVIKGGSVDASPENGLVMCRLSIGAMQVLENKLRSLEKFLRSRRNQRR
GLYGCVAGLGDLTGSILYGAGSELGAGDRGMVRNLFGAYSRSTEANGGGASNKRQRLPYS
PAELAAMEVRAMECIRQLLLRSSEALFLLQLLSQHHVTRLVQGFNTNLRQSLAQLTFHQL
VCTDEGDQIATRLISALMECYTGPEGRGTVDDISGRLREGCPSYFKESDHKFFLAVECLE
RAAVTPDPEEKKNLAREAFNLLSKVPESADLQTVCKRFEDLRFYEAVVHLPLQKAQALDP
AGDAFNDQIDAPAREHALAQREMCYEIVVSALRSLKGGASRGEFGSPVRPAAPKSALDQA
SRNKYICQIVQLGVKSPDRLFHEYLYRAMIDVGLENELLEYGGPDLVPFLQSGGHEPIQE
IRAASAVNSPMGQFGSPILPNQAKYFDLLARYYVLKQQHLLAAHILLRLAERRSTDAGDA
PTIEQRCQYLSNAVLQAKNATTSNGLVSSTKGAADNGLLDLLEGKLAVLRFQIKIKEELE
AIASRLEASSNNESVQNGAGMESTSTEDANLANNARQKAKELSLDMKSITQLYNDYAVPF
ELWEICLEMLYFASYSGDADSSIIRETCGRLIDQALSRGGIAEACAVLKRVGSHIYPGDG
AGLPLDSLCLHLEKAALERLESGVESVGDEDVSRALLAACKGATEPVLNTYDQLLSSGAI
LPSSKLRLRLLRSVLALLREWAMSVFAQRMGTSATGASLILGGTFSMDQTAVMNQGIRDK
ITSAANRYMTEVRRLPLPQSQTEAVYRGFRELEESLISPYPTDRY
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggaggatgagctcgttttgcgggatgtaaccagtgccggtatcgtcgtcggc
gatcgaattggccgagaaattgcttctcatcttgatcttgaagaagccctagaagcttcc
cgttactcgagccatccttattcaactcatcccaaagagtggcctcctttagttgaggtg
gtagatacttgggagttacctccggtacttgttgaaaggtataatgcagccggtggggaa
ggaactgctttatgtggcattttccctgaaattcgtagggcatgggcatctgttgataat
tcactttttctatggcgttttgacaagtgggatggtcagtgtccagaatacagtggggag
gagcaagctatttgtgctgttggtcttgcaaaatcaaaacctggtgtctttattgaagct
attcaatatttgttagttttagcaacacccgttgagctaattctggtaggagtatgctgc
tctggaggaggtgattgtacagatccatatgcagaggtctcactacagcccttgccagaa
tatacagttccatctgatggagtcactatgacttgtatcacatgtactaaggcaggtcgt
attttcctggctggccgtgatggccacatctatgaactgcattattcaactggttcaagc
tggcaaaagcgttgccgaaaagtttgcttaactgctggtttgggaagtgtcatatcaagg
tgggtagtgccaaatgtatttaagtttggagctgttgaccctattgttgaaatggttgtt
gataatgaaagaagcatgttatatgcacgaacagaagaaatgaaacttcaggtttttatt
ctgggctctaatggcgatggtgcattgaagaaagtagcagaagaaaggaatgtgatcagt
caaagagacactcattatgggggtagacaatcatcaggacaaagagctccaaatcgatca
gcaaaaccatccatagtttcaatatcacctttaactactgtggaatccaaagggctacac
cttgttgctgttttatcagatggcagaaggatttatcttacaacctctctatctagtgga
aatttaggtggcttcaacatgaatcatcataaacctacctgtctgaaagttgtcacgact
agaccctcgccgcccttaggtgtcagcagtggtcttgcctttggagctttgtctctttct
agcagacctcagaatgaagatctttcattgaaggttgagacatcatattattctgcagga
actcttgtactttctgattcctccccaccaactatgtcttctcttcttgttgtaagtagg
gattcaagtgcacaaacatctgtgtcgactacattaggaaccagctcaagaagtaatcgg
gcattaagggaatatgtttcttctttatcagttgaagggcgaatgctatttgtggcagat
gttttaccaatgcctgatgctgcaaaaacagttcactctctatattctgaaattgaatat
agtggatttgaaactttgtgtgagtcctctgaaaaggcatgtgcaaaactttgggcaaga
ggggatctttcaactcaacatatacttccaaggagaagacttgtcattttcagtaccatg
ggcatgatggaaattgtgttcaacaggcctgtggatattctcaggagattgtttgagtcg
aactccccaagatctatcttagaagatttctttaatcgttttggagctggtgaggcagct
gcaatgtgtttgattttagcagcaaggatagtttattctgaaaatcttataagcaatact
gttgctgaaaaggctgctgaagcctttgaggatccaagagtggttggaatgccacaactt
gaaggtagtagtgccctgtcaagcactaggacagctgctgggggattcagcatgggtcag
gtggttcaggaggccgagcctgtgttttcaggtgcttatgaagggctttgcctgtgctct
tccaggctactttttcctgtatgggaacttcctgtgatggttataaaagggggttctgta
gatgcttctcccgagaatggtttagtcatgtgtagactatctattggggctatgcaagta
ctggaaaacaagcttcgttccttagagaagtttttacggtctaggcgaaaccagaggagg
ggactttatggttgtgttgctggtttaggggacttgactggttcaattctttatggagct
ggttcagaattgggggctggtgaccgaggtatggtgaggaacttatttggtgcctattca
cgcagtactgaggctaatggtggtggtgcgtccaataagagacagaggttaccatatagt
cctgccgaacttgctgccatggaggtgagagcaatggaatgtataaggcagttgcttctc
agatccagtgaagccctgtttttgcttcaacttctttctcagcatcatgtaactcgctta
gttcaggggttcaacactaatctgcgacaatcgttggctcagttgacatttcatcagcta
gtttgtactgatgagggtgaccagattgctacaagacttatatctgctttaatggagtgt
tacactggtcctgagggcagggggactgttgatgatataagtggaagattacgagagggc
tgtcctagctatttcaaggagtctgatcacaagttctttctagctgtagagtgtcttgaa
agagctgcagttactcctgatcccgaagagaagaagaatcttgctagggaggccttcaat
ctcttaagtaaagttccagagtctgctgatttacaaactgtctgcaaacggtttgaggat
ttaaggttctatgaagctgtggttcacttacctctgcaaaaggcacaggctcttgatcca
gccggtgatgcttttaatgaccaaattgatgcacctgctcgagaacatgcacttgcccag
cgtgaaatgtgttatgagatagttgtcagcgcattacggtctttgaaaggtggggcttca
cgtggggaatttggatctccggttagacctgcagctccaaaatctgcccttgatcaggca
tctcggaacaaatacatatgccagattgtgcagcttggtgttaaatctcctgatagattg
tttcatgagtacttgtaccgagcaatgattgacgtaggccttgaaaatgaactactggag
tatggtggtcccgatttggtgcctttcctacaaagtggtggccatgaaccaatacaagag
attcgagctgcttctgcagtgaattcaccgatgggtcaatttggatcacctatcctgccc
aatcaagcaaaatactttgatctcttggcacgatattatgtcttaaaacagcagcacctg
cttgcagcccatatattgctaagactggctgaaagacgctcaactgatgcgggggatgca
cctactatagagcaaaggtgtcagtacttaagtaatgcagttttacaagctaagaatgct
actaccagtaatggcctggtgagttctacaaagggtgctgctgacaatggtctactagat
ttactggaagggaaacttgctgttcttcggtttcagattaagatcaaagaagaactggaa
gctatagcttccaggctagaagcttcatcaaataatgagtctgtccaaaatggagctggc
atggaaagcacatcaactgaggatgctaatcttgcaaataatgcacgacaaaaggccaaa
gagctatcattagatatgaagagtattactcagctatataatgactatgctgttccattt
gagctttgggagatttgcctcgaaatgttatactttgcaagctattctggcgatgctgac
agtagtattataagagaaacatgtggtagacttattgatcaagctctttcaaggggtggc
attgccgaagcctgtgcagtactcaagcgggttggttcccacatttatcctggagatgga
gctggtttacctttagactctttgtgtcttcatctggaaaaggctgcactggagagattg
gagtcaggggttgaatcagttggggacgaagatgtttcaagggctcttctcgcggcttgc
aaaggtgcaactgagcctgttttgaacacttacgatcaattgctatcaagtggagctatt
ttgccatcatccaagctaagattgcgtcttctcagatcagtactagcactacttagagag
tgggcaatgtctgtatttgcacagagaatgggaacaagcgcaactggagcctcgttaatt
ttaggtggaacattctcaatggatcaaacggcagttatgaatcaagggattcgtgataag
attactagtgcagcaaacaggtacatgactgaggtgcggagattgccccttccacaaagt
cagactgaggctgtttacagaggtttccgtgaactcgaagagtcgctaattagtccatat
cctactgaccgatactga
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