Cannabis sativa (hemp): 115712808
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Entry
115712808 CDS
T08987
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115712808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115712808
Spliceosome [BR:
csav03041
]
Complex C
Other components
Step II factors
115712808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
115712808
NCBI-ProteinID:
XP_030497046
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All DBs
Position
4:complement(82135316..82138464)
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AA seq
539 aa
AA seq
DB search
MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACQNCGAMTHDAKACMDRPRKVGAKW
TNKHIAPDEKVETFELDYDGKRDRWNGYDASTYSLVIERYEARDEARRKFLKEQQFKKLE
KNNNADGDGEGGDGEGGDSDEDVDEDRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR
NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQYRNSGQALEFK
EMNIHSWEAFDKGQDIHMQAAPSQAELLYKNYQVIKEKLKSQTKDTILEKYGNAATEEEI
PRELLLGQSEKEVEYDRAGRIIKGQEMALPKSKYEEDVYINNHTTVWGSWWKDHQWGYKC
CKQVIRNSYCTGAAGIEAAEAASDLMKANIARKEANEEPPAPVEDKKVATWGTDIPDDLV
LDEKLLAKSLKKEDERRKEERDERKRKYNVKWNDEVTQEDMEAYRMKRVHHDDPMKDFL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcagtggcattcaaatctagagaagatcatagaaagcaaattgaattg
gaagaagctcgtaaagcggggcttgctcctgctgaagttgatgaagatggaaaagagatt
aaccctcatattcctcagtatatgtcctctgcaccttggtatctcaactcagagagacct
agtttgaaacatcaaaggaagtggaaatctgatccaaattatactaaatcttggtatgat
agaggtgccaagattttccaagctgataaataccgaaaaggagcatgtcaaaattgtggt
gctatgacacacgatgcaaaagcttgtatggacagaccccgcaaagtaggagcgaagtgg
acgaacaagcatattgcacctgatgaaaaagtagagacctttgagcttgattatgatgga
aaacgtgatcgttggaatggatatgatgcgtcgacctattctcttgtcattgagagatat
gaagcgagggatgaagctcgaaggaagtttctgaaagagcagcaatttaaaaaattggag
aagaataataatgcagatggtgatggtgagggaggtgacggtgagggaggggatagtgat
gaagatgttgatgaagatagggttgatgaagccaaagttgatgagtccaaacagatggac
tttgcgaaagttgaaaagcgtgtgcggactactggtggtggaagcacaggaactgtcagg
aatttgcgtattcgcgaggacacagcaaagtatcttcttaatcttgatgttaactctgca
cattacgatcccaagacccgttctatgcgtgaggatcctcttccagatgcagacccgaac
gaaaagttctacttaggtgataaccaatatagaaatagtggccaagcattggagttcaag
gaaatgaacattcattcttgggaagcatttgacaagggacaggatattcatatgcaagcg
gctccctcccaagccgagctgctttacaagaactaccaggtcataaaagagaaactgaag
tcccaaacaaaggacaccatcttggaaaaatatggcaatgcagctaccgaggaagaaatt
cctagggaacttttactggggcaaagcgagaaggaagtggagtatgatcgtgctggtagg
atcatcaagggacaggagatggcccttccgaaaagcaagtatgaagaagatgtttacatt
aacaaccacacaactgtttggggttcatggtggaaggatcatcagtggggttacaagtgc
tgcaagcaggtaattcgaaacagctattgtactggtgctgctggtatcgaagctgccgag
gctgcttcagatctcatgaaggctaacattgcccgaaaagaagccaatgaagaaccacct
gcgccagttgaggataaaaaggttgctacttggggaaccgatatcccagatgatttagtc
ttggacgagaaattacttgccaaatcgcttaagaaggaggatgaaaggaggaaagaagag
agagacgaaagaaagcgcaagtacaatgtcaaatggaatgatgaggtgactcaggaagac
atggaggcatacagaatgaagagagtacaccatgatgatccaatgaaggatttcctgtga
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integrated database retrieval system