KEGG   Cannabis sativa (hemp): 115712855
Entry
115712855         CDS       T08987                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115712855
Spliceosome [BR:csav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115712855
 Complex B
    115712855
SSDB
Motif
Pfam: zf-CCCH RRM_1 RRM_MUD2_C zf_CCCH_4 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 115712855
NCBI-ProteinID: XP_030497115
LinkDB
Position
4:52539744..52548959
AA seq 878 aa
MGKFPGLQMDFGLGFGKGPKETMAEEVTAIAKAEGLEEEEREMQPEFEGLALENGMNRKE
KRKALKKMKRKQIRKEVAMKEREEVEAWLNDPEEQKRISLMEHEEAERSARERKEFEERE
KAWLEAMEMQRKKKMEEEEEEEEEQRRKALDEESRKQQVETANEVDESDEWEYEEGPAEI
IWQGNEIIFKKKRVRVSKKNSHLDDSSIKEDVDRPTSNPLAPEFETFSEYRNSLMSGQQL
IESVAEQVPNFGTELDKAHCPFHLKTGACRFGQRCSRVHFYPDKSCTLLIKNMYSGPGLA
WEQDEGLEYTDEEVERCYEEFYEDVHTEFLKFGEIVNFKVCRNGSSHLRGNVYVHFKSLD
SAVLAHHFVNGRYFAGKQVGCEFVNLTRWKVAICGEYMKSRFKTCSRGTACNFIHCFRNP
GGDYEWADSDKPPPRYWVQKMVALFGHSNESVHEGLREQGNLDEPNSAGKRSRADANWYC
SRRSGSRETSYRDDHGHSGSSRRKENLDFVRRTEDQFRCTSDGIRSLDDDIHEDDKHQKK
RKKRHTDSDAKIFDDDRKKSGDESHDYMRETSRWKSKEYKNNTHEYGSDGERLTREGDRK
KHHERARKSSNYHKRLRKLDDYEDYRSREIDFNRRGKSGNKEISHDSRKSSSRRRRYPGN
HLDRNNRSHDTGRELSDKGSYGDELLGEDVARHFCQIRTQTNEVSNVSDDHGEPENSLEN
RGDSCIDIVKADSCNSKDKSYDSGTSSQYDERYRSHDLWESEQCSDKKSHKSRMVTSFSS
SSGQYNGKQKSNDHDLELHHYQDQKENPSESEEVISEHWKSKSKSGSDHYEQCSAESGRE
SRSRRSRKSSHRRHSKSNRLEKRDFPEGDKKSREDLRR
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgggaaagtttcccggattacaaatggattttggcttgggctttgggaagggaccgaag
gaaacaatggcagaagaagtaacagccatagcgaaagccgaagggttggaggaagaagaa
agagaaatgcagccagaatttgagggcttagctttggagaatggaatgaataggaaggag
aagaggaaggccttgaagaagatgaagaggaagcagataagaaaagaggtagctatgaag
gagcgggaggaagtagaggcgtggcttaacgatccagaagagcagaagaggatcagtttg
atggagcatgaagaggcagagaggtccgccagggagaggaaggagttcgaggagagagag
aaggcctggctcgaggccatggagatgcaaaggaagaagaagatggaagaagaagaagag
gaggaggaggaacaacgtaggaaggcactggacgaagagtctcggaagcagcaggttgag
actgcaaatgaggtagatgagagcgatgaatgggaatacgaagaaggtcctgctgaaatt
atctggcaaggaaatgagatcattttcaagaagaaaagggtcagggtctcgaagaaaaac
agtcacctagatgattcaagtattaaagaggatgttgataggcccacatctaatcctctt
gcaccagagtttgaaactttttctgagtatagaaactcattgatgtcaggacagcagttg
attgagagtgttgccgaacaagtaccaaattttggaactgaactggataaagctcattgt
cctttccacctaaagaccggagcttgtcggtttggtcagcgttgtagtagagtccatttc
taccctgataaatcttgcactctgcttatcaagaatatgtatagtggacctggccttgct
tgggagcaagatgaggggcttgagtatactgatgaggaggttgaacgctgttatgaagaa
ttttatgaggatgtccatacagagttcttgaaatttggggaaattgtgaatttcaaggta
tgtagaaatgggtcatctcatctgcgaggaaatgtatatgtgcacttcaagtccttggat
tcagcggttctggcacatcattttgtcaatggtcgctactttgctggaaaacaggtggga
tgtgaatttgttaacctgaccaggtggaaggttgcaatatgtggggagtatatgaagtca
agatttaagacatgttcgcgaggaacagcatgcaatttcattcactgttttcgcaatcct
ggtggagattatgaatgggctgatagtgacaaaccacccccgaggtattgggtgcaaaaa
atggttgcattatttggccattctaatgaatctgtacacgagggactaagggaacaaggg
aatttggatgaaccaaatagcgctggcaaaagatcaagagctgatgcaaactggtattgc
tcaagaagatctggatctagagaaacaagttacagggacgaccatggccatagtggttca
agtagaagaaaggagaatttagatttcgtgaggagaacagaagatcagtttaggtgtaca
agtgatggtatcagaagccttgatgatgatatccatgaggatgataagcatcagaagaaa
agaaaaaagcgtcatactgattctgatgcaaaaatatttgatgacgatagaaagaaaagt
ggagatgaatctcatgattatatgagggaaacctcaagatggaagagtaaggaatacaag
aacaacactcatgaatatggttcagatggagaacggttgacgagggagggagacagaaag
aaacaccatgagcgtgctaggaaaagctcaaattatcataagagattgagaaagctggat
gattatgaagattatagaagtcgtgaaatagatttcaataggagagggaagagtggtaac
aaggaaatatcacatgatagcaggaagagcagctcaagacgccgtagatatcctggtaat
cacttggacaggaataacagaagtcatgatactggtcgagagttgtctgacaaaggcagc
tatggtgatgagttgttgggcgaggatgtagcaaggcacttttgtcaaattaggacacaa
acgaatgaagtatcaaatgtttctgatgatcatggagaaccagaaaatagcttggaaaac
agaggcgattcgtgcatagatattgtaaaagcagattcttgtaacagtaaagataagagc
tatgattctggcacttcaagtcaatatgatgagagatatagatcccatgatctatgggag
tctgaacagtgttccgataagaaatcccacaagtctaggatggtaactagttttagcagc
agttcaggtcaatacaatggaaagcaaaagtcaaatgaccatgatttagaactacatcat
tatcaagaccagaaggagaatccttcagaatctgaagaagttatttcagaacactggaag
tctaaaagtaagtctggctctgatcattacgagcaatgttccgctgagagtgggagagaa
agcagatcaaggagaagcagaaaatcaagtcataggagacactcaaagtcaaatagattg
gagaagagggattttccagagggtgacaaaaaatctcgagaagatttgagacggtga

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