Cannabis sativa (hemp): 115712868
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Entry
115712868 CDS
T08987
Name
(RefSeq) protein NPGR2
KO
K21843
tetratricopeptide repeat protein 7
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115712868
Membrane trafficking [BR:
csav04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
115712868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
ANAPC3
TPR_12
TPR_14
TPR_7
TPR_17
TPR_8
TPR_6
TPR_11
TPR_CcmH_CycH
TPR_1
ARM_TT21
TPR_MalT
TPR_EMC2
TTC7_N
SHPRH_helical-1st
Motif
Other DBs
NCBI-GeneID:
115712868
NCBI-ProteinID:
XP_030497133
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All DBs
Position
4:complement(81717297..81721494)
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AA seq
738 aa
AA seq
DB search
MKKKSRVTRVKRGEFKKGFGNFLKCLCSGDQLRTEDKMVPSFESLSIEDYGNEIISRARE
IAKQPDTGNIEEAELSLRKNGVLNYEEARAVLGRYEYQKGNVEAALRVFEGIDISMVAPN
IKSTLSRRVERRRRSSQNIETPQMSIPAVSLILEAIFLKSKSLQALGRFKEAAQSSKFVV
DIVESSLPEGLPENFGAECKLQETIIQAVELLPELWKLADCPSEAILSYRQALLHPWNLD
SETAARIQKEFAIYLLYSGVEAAPPNLRFQMDGSFVPKNNLEEAILLLMILLRKISLKRI
EWDQSILDHLSFALSISGDTRSLAHQVEELLPGIIRRNERYYILALCYYGAGDCSVALDL
LKKLISSGDDPNHIPALLMASKICEEIPNFEQGVHFARRALEILDSRCDQLKSTANYLLG
ASLSLQAKSAVTDSERVSRQSEALRVLETAGKLTRMEDPIILYQLSLGNAEQRKLNDALH
YAKNTLKLEGGSNIKTWLLLARILSAQKRFVDAEVIIDTALEQTGKWDQGELLRTKAKLH
IAQGHIRNAVETYTQILAILQVQKKSIGSEMKLHKSGSRRSPRSLELEIWHDLTYIYIRL
SQWRDAEVCLSKSKSLCSYSATRWHATGVLYEAKGEYKEALKAFLVALNTDPTHVPSLIS
TAEILRQLNNESVAIVRSFLMEALRLDRMNHSAWYNLGMFYKSKGNNNNNASSSSLEAAE
CFEAAISLEETAPVEPFR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagagtagagttaccagagttaagagaggtgagtttaagaagggctttgga
aattttttgaagtgcctttgttcaggggaccaattgagaactgaagataaaatggtgcct
tcatttgaatccctttcgattgaggattatggtaatgagataatttccagagctcgcgag
attgctaagcaaccggatactggtaatattgaagaagctgaattatctcttcgcaagaat
ggtgtcttgaactatgaggaagcaagagcagtgttaggaagatatgaatatcagaaagga
aatgttgaagctgctttacgtgtatttgaaggaatagatatatcaatggtggctcccaat
attaaatcaaccctttctagaagagtggaacgtcgtaggagaagctcccaaaatattgaa
accccacaaatgtcgattcctgctgttagcttaattttggaagcaatctttctcaaatcg
aaatcattgcaggctcttgggaggtttaaagaagctgctcaatctagcaaatttgttgtg
gacatagttgaatcttcattaccagaaggcttgcctgaaaactttggtgctgaatgtaaa
ttgcaggagactattatacaggctgttgagctgcttcccgaactatggaagctcgctgat
tgtccaagtgaagcgatcttgtcttaccgacaggctttactccatccttggaatcttgac
agtgaaaccgctgctaggattcagaaagagtttgctatttatcttctttacagtggagtt
gaagcagctcctcctaacctccgtttccaaatggatggctcatttgtaccgaaaaacaat
ttagaagaggctatacttttgcttatgattctgcttagaaaaatttctctcaagagaatt
gaatgggatcagtcaatcttggaccacctttcatttgctctatctatttcgggggatacc
aggtctctggctcatcaagtagaagaactgcttccggggataattagacgaaatgaacgg
tattacattcttgctctttgttattatggagccggtgattgctcggttgccttggaccta
ttgaagaaattaattagtagcggagatgatcccaatcatatcccagctttacttatggcc
tcaaagatatgcgaggaaatcccaaatttcgaacaaggagttcattttgctcgtagagcc
ctcgaaattttggacagtagatgtgatcagttgaaaagcactgccaattatctcttgggc
gcttctctttccttacaggctaaatcagctgttaccgattctgaaagggtatcgagacaa
tctgaagcacttcgggttttggaaactgctgggaaattgacaagaatggaagatcctata
atcctttaccaacttagcctcggaaacgctgagcaaaggaaattaaacgatgcacttcat
tatgcaaaaaacacacttaaactagaaggtggatccaacataaaaacatggcttttgtta
gctcgaatattatcagctcaaaagaggtttgtggatgctgaagtaatcatagatactgca
ttggagcaaaccgggaaatgggatcaaggagaactgttgcgaacaaaagctaaacttcac
attgcgcagggtcatataagaaacgccgttgagacatatactcaaattcttgcaattctt
caagttcagaagaaaagcattggttctgaaatgaagttacataagagtggtagtagaaga
tcacctagaagtttggaattagaaatatggcatgatctaacttatatctatataagattg
tcacaatggcgcgatgctgaggtttgtctttctaaatccaagtccctttgttcttactcc
gccaccagatggcacgccacaggtgtgctttatgaagctaaaggcgaatacaaagaagct
ttgaaagctttcttggttgctttgaataccgatcccacacatgtcccgagcttgatttcc
acagctgagattctcaggcaactaaacaacgaatcggtggctattgttcgaagctttctg
atggaggctttacggcttgacagaatgaaccattctgcgtggtacaatctcggtatgttc
tataaatcaaagggtaataataataataatgcttcatcatcttcattagaagctgcagag
tgttttgaggctgcaattagtcttgaagaaactgcacctgttgaacctttcagatga
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