Cannabis sativa (hemp): 115712872
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Entry
115712872 CDS
T08987
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
csav04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115712872
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115712872
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115712872
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115712872
03036 Chromosome and associated proteins [BR:
csav03036
]
115712872
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115712872
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115712872
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115712872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_1
P2R3B_EF-hand
DUF4187
YKL065W-A
Motif
Other DBs
NCBI-GeneID:
115712872
NCBI-ProteinID:
XP_030497140
LinkDB
All DBs
Position
4:complement(81847999..81853602)
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AA seq
540 aa
AA seq
DB search
MDIDSVGKGDGDIGSCLDPELLILPELSPLALKSNPSIADDLFDQWLSLPETGRLVKSLI
DDAKAGNPINAIGNSNTAGSHTTPSMFPAASTPPLSPRSSSGSPRFSKQRSSPPLGSPLK
LVTEQVREVIPQFYFKNGRPPPKELEQQFFSRIDDFFNNHPDGLRLHEFKPLTKEICKLP
TFFSSVLFRKIDTDSTGIVTKNGFIKYWVDSNMLIMDTETQIFKLLKRQNCNYISQVDFK
PVLQELLATHPGLEFLKGTPEFQERYAETVVYRIFYYINRAANSRLTLRELKRGNLIDAM
QHVDQEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDKENLIRYSNHALTYRIVDRI
FSQVPRKFTSKIEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDENGVLTPNEMQFF
YEEQLHRMECMGQEPVLFEDILCQIVDMISPEKDDAIMLRDLKRCKLSGNVFNILFNLIK
FMSFESRDPFLIRQEREDPSLTEWDRFAHREYIRLSMEEDGEDASNGSIEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgattctgtgggtaagggagatggtgatattggtagctgtttggatcctgaa
ctgttgatacttccagagttatctcctttggctttaaaatcaaacccttcaattgctgat
gatttgtttgatcaatggctttctcttcccgaaactggacgactggtgaagtctttgatt
gatgatgcgaaggcaggcaatcccataaatgccattgggaactcgaacactgctgggagc
cataccacgccttccatgttccctgctgccagtactcctccactatctccaagaagttca
tctggttctccacgtttttcaaagcaacgaagcagtcctcctcttggttctccacttaag
ttagtcactgaacaagttcgagaagtcattcctcagttctatttcaaaaatggccgtcca
ccgccaaaggaactagagcaacaatttttctctaggattgatgactttttcaacaatcat
ccagatggattgcgattgcatgaatttaagccgcttacaaaggaaatatgcaagctgcca
acatttttctcttccgtacttttcaggaagattgacacggatagcacagggatagtgacc
aagaatgggttcataaaatactgggttgatagcaatatgctgattatggatactgagact
cagatttttaaacttttgaagcggcagaattgcaattatatttctcaggtagacttcaaa
cctgttcttcaagagcttttggcaacccaccctgggttggagttcttaaagggcacacct
gaatttcaagaaagatatgctgaaacagttgtatatagaatattttactacatcaataga
gcagcaaatagccgtcttacccttagggagctaaagcgaggaaatttgattgacgcaatg
cagcatgtagatcaggaggaggatatcaacaaagttctgagatacttttcatatgaacat
ttttacgttatatactgtaaattctgggagctggacacggaccatgatttcttcattgac
aaggagaacctcataagatacagtaatcatgcccttacctacaggattgtcgatagaata
ttttcacaggtcccacggaagtttactagcaagattgaagggaaaatgggctatgaagat
tttgtttattttatgctgtcagaggaggacaagtcttctgaaccaagtcttgagtactgg
ttcaagtgcatcgatttggacgagaatggagtcctgacaccgaatgaaatgcaattcttt
tatgaagaacagctgcatcgtatggaatgcatgggccaagaacctgttttatttgaggat
attttatgtcagattgttgatatgatttcaccagagaaggatgatgctataatgctacga
gatttgaaaagatgcaagctttcaggaaatgtcttcaatatccttttcaatctgataaaa
tttatgtcatttgagagccgtgatccgtttctcatccgacaggaacgtgaagatccatct
ttaacagagtgggaccgatttgcacacagagagtatatcaggctctctatggaagaagat
ggcgaagatgcctcaaatggaagtatagaagtttgggatgaatcacttgaggccccattt
taa
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