Cannabis sativa (hemp): 115713224
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Entry
115713224 CDS
T08987
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00600
Sphingolipid metabolism
csav01100
Metabolic pathways
Module
csav_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115713224
Enzymes [BR:
csav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
115713224
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
115713224
NCBI-ProteinID:
XP_060969263
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Position
4:complement(11994535..12000327)
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AA seq
539 aa
AA seq
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MDYLNSLWIRFATFANSYLSQYEPLLLVSAPLVALFLASILQSIVCVVHEKGLKATILAL
FMNTIKLVPGVKSYIDAEKQKVVDKLNSGGKSKRQGWRTELPSVGMGAGVIDIMKDEKRK
DVAWQGKCSGTVYIGGSECEGHFSLINEACSMFSHTNPLHLDVFQSVVRFEAEVVAMTAA
FLGSKEKSSGGQICGNMTSGGTESIILAVKSSRDYMKAKKGISSPEMIIPESAHSAYDKA
AQYFNIKLWRVPVNKEFQADVKAIKRYINRNTVLIVGSAPGFPHGIIDPIEELGELASSY
GICLHVDLCLGGFVLPFARRLGYPIPPFDFSIKGVTSASVDVHKYGLAPKGTSVVLYRNH
DIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMMSLGEEGYSQNTRQIMDVSKR
IQKGIKEIPELFIVGRPDMTIVALGSDVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTL
QHVPAVEDFLGDLRESVKTVKENPGPINGGLAPIYGAAGRIPDRSMVQDLLVNYMDGTC
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggattatttgaattctctgtggattcgttttgcaacttttgctaattcgtacttatcg
caatatgagcctttgcttctggtttcggctcctctcgttgccctcttcctagcttctata
ctccaatcgattgtttgcgttgtccacgagaaaggactcaaagctaccatcttagcgctt
ttcatgaacaccatcaaattggttccaggtgtgaagagttatattgatgccgagaaacag
aaggttgtagataaattaaattcgggtggcaaatctaaaagacaaggttggaggactgaa
ttgccaagtgtggggatgggagcaggagtcatagacattatgaaagatgagaaaagaaaa
gatgtagcttggcaaggaaaatgctctggtacagtctatattggtggaagtgaatgtgaa
ggacacttttctctgattaatgaggcatgctcaatgttttcacatacaaatccattacat
ttggatgtattccaaagtgttgtaaggtttgaagcagaagtggttgccatgactgctgca
tttcttggcagtaaagaaaaatcttctggagggcaaatatgtggaaacatgacttcaggg
ggaactgagagtatcattttagcagtgaaatcatcacgtgactatatgaaagctaagaaa
ggaatatcatcacctgaaatgataatacctgaatctgcacattcagcatatgacaaggct
gcacaatatttcaacatcaagttgtggcgtgtccctgtaaataaagagtttcaagcagat
gtcaaagcaattaaaagatatatcaatagaaacaccgttttgattgttggatctgcacct
ggttttcctcatggaatcattgaccctattgaggaacttggtgaattagcttctagctat
gggatatgtctacacgtggacctctgtcttggtggatttgtattgccttttgcacgtaga
ctagggtatcctatccccccttttgatttttccatcaaaggagtgacctcagcatcagtt
gatgtgcacaagtatgggttggctcctaagggaactagtgtggttctgtatagaaatcat
gatattagaaagcatcaatttgttgcggtaactgagtggtcaggcggcctctatgtgtct
ccaaccatagctggtagtaggccgggtggtttaatagctggagcttgggcagccatgatg
tctctgggcgaagaagggtactcacagaacacaagacaaatcatggatgtatcgaagaga
attcagaaagggataaaagaaattccagagttgtttatcgtcggaaggccagacatgaca
attgttgcacttggatctgatgttttggacatatttgaagtaaatgatataatgtcatct
aaaggctggcatttaaatgcacttcagagacccaatagcatccatatatgcgtgaccctt
caacatgtaccagctgttgaggacttccttggagatttgagggaatcagttaaaacagtg
aaagagaatccgggtccgataaatggcggcctagctcccatatatggtgcagcagggagg
atcccagatagaagcatggttcaggacttgttggtaaactacatggatggtacatgctag
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