Cannabis sativa (hemp): 115713424
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Entry
115713424 CDS
T08987
Name
(RefSeq) WD repeat-containing protein PCN
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115713424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115713424
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115713424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
115713424
NCBI-ProteinID:
XP_030497766
UniProt:
A0AB40E6R0
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Position
X:complement(23496535..23501850)
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AA seq
808 aa
AA seq
DB search
MVEAYYYRNSTIDWKPSPVVALATSVDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTVHG
DPDSRVSSLVWCRGGSKDLPCGRLLSSSIDGSVSEWDISLLKKKTLLDSTGVSIWQMSAA
PCNQNTEPGTQHLGNGYLSNNLNEESSDSEDDSDSAELHVQSVIENPRVALACDDGCVRI
YSVIEDKLIYTKTLPRVSGRILSVTWSPDAKRIFAGSSDGFIRCWNPILGHEIYRITVGL
GGLGSGPDLCVWSLLSLRSGTLVSADSTGSVQFWDSKHGTLLQAHSYHKGDVNALAAAPG
HNRVFSAGSDGQVILYKLSSEIIESTDGDSSNSMKRWTYVGYTRAHSHDVRALTVAVPIS
REDPLPDQDVKKLRRKEKPVDFSYHKWAHLGVPMLISAGDDTKLYAYSAKEFTMFAPHDI
CPAPQRVPIQLVVNTAFNESSLLLVQAASWLDICCVRTKNGAPPDMAYGPSGNPVATDLL
ARIKSKGSRRIICSTISNSGTLFAYSDHVKPNLFELKRKIGKSGWTVDKKQLPRNLPYAH
SMVFNFDSSQLMIAGHDRKIYVVDVVNSEIINVFTPCNDPHDEGLPPSEPPITKMFTSSD
GQWLAAINCFGDVYIFNLEIMRQHWFIARLDGASITAGGFPPLNNNVLIVTTSSNQVYAL
DVEEKKLGDWSRRNSHVLPRRFQEFPGEVISLCFPPSKSPTVIVYSARALCRIDFGLPVD
QEDESGIVNGQDGAVKSLGPPSGSLKRKLRDYQTKLLGRKNFDFVSFRDPILFIGPLSNN
SILIIDKPWMEVVKNLEAPPIHKHLFGT
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcttattattacaggaacagcacaattgattggaagccatctccagtagta
gccctagccaccagcgtcgacgactctcaggttgctgcagctcgcgaggacggatctctt
gagatttggctcgtctcacccggctctgttggctggcactgtcagctgactgttcatggc
gaccctgattcaagagtctcgtcgcttgtgtggtgtcggggtggctcaaaggacttgcct
tgtggccggctattatcgtctagcattgatggctcagtttccgagtgggatatttccctc
ctcaagaaaaagactcttttagattcaacaggcgtgtcaatatggcagatgtctgcggct
ccctgtaatcaaaatacagagccggggacgcagcatttaggaaatggatatttaagtaat
aacttaaatgaggaaagtagtgatagtgaagatgactcagattctgctgagcttcatgtg
cagtcagttattgagaatccacgggtagcattagcttgtgatgatggttgtgtgcgaata
tacagtgttattgaagataaacttatttacactaaaacgttgcccagggtcagtggacga
attttaagcgtgacatggagtcctgatgctaaaaggatatttgcgggaagcagtgatggg
tttataagatgctggaatccaatattgggtcatgaaatttataggattacagttggacta
ggaggtttgggcagtggacccgatctttgtgtgtggtcattactttcattgaggtctggg
acacttgtaagtgcggatagtactggtagtgtacaattttgggacagtaagcatgggact
ctgttgcaggcacattcatatcataaaggtgatgtgaatgcactggcagctgctccagga
cataacagggtgttttctgcaggttctgatggtcaggttattctttataagctctcaagc
gagataatagaatccactgatggtgattcttctaattcaatgaagagatggacctacgtt
ggttatacaagagctcattctcatgatgttagggctttgacggtggctgtgcctatcagc
cgagaagatccattaccagatcaagatgtgaaaaaacttcgacgtaaggaaaagccggtt
gactttagttaccataagtgggcacatttgggtgttcctatgcttatttccgccggtgat
gataccaagctctatgcctactcagctaaggaattcacaatgtttgctccacatgatatt
tgtcctgcacctcagagagtgcctattcagctggtagtaaatacagcattcaatgaatca
tcattacttcttgtccaggctgcttcttggttggatatatgttgtgttcgaacaaaaaat
ggtgcgcctcctgatatggcttatggtccttctggaaacccagtggctacagatctgctt
gctcgaattaagagtaagggatctcggagaattatttgtagcaccatttctaattcaggg
accctttttgcttattctgaccatgtgaaacccaacctattcgaactgaaacgtaaaatt
ggtaagagtggttggactgtggataaaaaacaacttcctcgaaacctaccatatgcccat
tccatggttttcaattttgattcttctcagttgatgatagccgggcatgatagaaaaatt
tatgttgtagatgtggtcaactcagaaataataaatgtattcactccttgcaatgatcca
catgatgaaggattgccacctagcgagcctcccattactaaaatgttcaccagttctgat
gggcaatggctagctgccatcaactgctttggagatgtatatattttcaatctggagata
atgagacagcactggtttatcgcaagactagatggtgcctctattacagctgggggtttt
cctccacttaataataatgtgcttatagttacaacttcttcaaatcaagtctatgcatta
gatgtggaggagaagaaattgggggattggtccaggcgaaattcacatgttctacctcga
agattccaggagtttcctggggaagtcattagtctatgtttcccaccatcaaaatcacca
actgtgattgtttatagtgccagggcactttgccggatagactttgggttgcccgtggat
caagaggatgaaagtgggatagtaaatggtcaggatggagcagtaaagagtttaggtcct
cctagtgggagtttgaaacgtaaactaagagactaccaaacgaaactccttggtagaaag
aatttcgactttgttagtttcagagaccctattttatttattggacccctttcgaataat
tctatcttgatcatagacaaaccttggatggaagtggttaaaaaccttgaagctccacca
atacacaaacacttatttgggacataa
DBGET
integrated database retrieval system