KEGG   Cannabis sativa (hemp): 115713424
Entry
115713424         CDS       T08987                                 
Name
(RefSeq) WD repeat-containing protein PCN
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115713424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csav03009]
    115713424
Ribosome biogenesis [BR:csav03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    115713424
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 115713424
NCBI-ProteinID: XP_030497766
UniProt: A0AB40E6R0
LinkDB
Position
X:complement(23496535..23501850)
AA seq 808 aa
MVEAYYYRNSTIDWKPSPVVALATSVDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTVHG
DPDSRVSSLVWCRGGSKDLPCGRLLSSSIDGSVSEWDISLLKKKTLLDSTGVSIWQMSAA
PCNQNTEPGTQHLGNGYLSNNLNEESSDSEDDSDSAELHVQSVIENPRVALACDDGCVRI
YSVIEDKLIYTKTLPRVSGRILSVTWSPDAKRIFAGSSDGFIRCWNPILGHEIYRITVGL
GGLGSGPDLCVWSLLSLRSGTLVSADSTGSVQFWDSKHGTLLQAHSYHKGDVNALAAAPG
HNRVFSAGSDGQVILYKLSSEIIESTDGDSSNSMKRWTYVGYTRAHSHDVRALTVAVPIS
REDPLPDQDVKKLRRKEKPVDFSYHKWAHLGVPMLISAGDDTKLYAYSAKEFTMFAPHDI
CPAPQRVPIQLVVNTAFNESSLLLVQAASWLDICCVRTKNGAPPDMAYGPSGNPVATDLL
ARIKSKGSRRIICSTISNSGTLFAYSDHVKPNLFELKRKIGKSGWTVDKKQLPRNLPYAH
SMVFNFDSSQLMIAGHDRKIYVVDVVNSEIINVFTPCNDPHDEGLPPSEPPITKMFTSSD
GQWLAAINCFGDVYIFNLEIMRQHWFIARLDGASITAGGFPPLNNNVLIVTTSSNQVYAL
DVEEKKLGDWSRRNSHVLPRRFQEFPGEVISLCFPPSKSPTVIVYSARALCRIDFGLPVD
QEDESGIVNGQDGAVKSLGPPSGSLKRKLRDYQTKLLGRKNFDFVSFRDPILFIGPLSNN
SILIIDKPWMEVVKNLEAPPIHKHLFGT
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggttgaagcttattattacaggaacagcacaattgattggaagccatctccagtagta
gccctagccaccagcgtcgacgactctcaggttgctgcagctcgcgaggacggatctctt
gagatttggctcgtctcacccggctctgttggctggcactgtcagctgactgttcatggc
gaccctgattcaagagtctcgtcgcttgtgtggtgtcggggtggctcaaaggacttgcct
tgtggccggctattatcgtctagcattgatggctcagtttccgagtgggatatttccctc
ctcaagaaaaagactcttttagattcaacaggcgtgtcaatatggcagatgtctgcggct
ccctgtaatcaaaatacagagccggggacgcagcatttaggaaatggatatttaagtaat
aacttaaatgaggaaagtagtgatagtgaagatgactcagattctgctgagcttcatgtg
cagtcagttattgagaatccacgggtagcattagcttgtgatgatggttgtgtgcgaata
tacagtgttattgaagataaacttatttacactaaaacgttgcccagggtcagtggacga
attttaagcgtgacatggagtcctgatgctaaaaggatatttgcgggaagcagtgatggg
tttataagatgctggaatccaatattgggtcatgaaatttataggattacagttggacta
ggaggtttgggcagtggacccgatctttgtgtgtggtcattactttcattgaggtctggg
acacttgtaagtgcggatagtactggtagtgtacaattttgggacagtaagcatgggact
ctgttgcaggcacattcatatcataaaggtgatgtgaatgcactggcagctgctccagga
cataacagggtgttttctgcaggttctgatggtcaggttattctttataagctctcaagc
gagataatagaatccactgatggtgattcttctaattcaatgaagagatggacctacgtt
ggttatacaagagctcattctcatgatgttagggctttgacggtggctgtgcctatcagc
cgagaagatccattaccagatcaagatgtgaaaaaacttcgacgtaaggaaaagccggtt
gactttagttaccataagtgggcacatttgggtgttcctatgcttatttccgccggtgat
gataccaagctctatgcctactcagctaaggaattcacaatgtttgctccacatgatatt
tgtcctgcacctcagagagtgcctattcagctggtagtaaatacagcattcaatgaatca
tcattacttcttgtccaggctgcttcttggttggatatatgttgtgttcgaacaaaaaat
ggtgcgcctcctgatatggcttatggtccttctggaaacccagtggctacagatctgctt
gctcgaattaagagtaagggatctcggagaattatttgtagcaccatttctaattcaggg
accctttttgcttattctgaccatgtgaaacccaacctattcgaactgaaacgtaaaatt
ggtaagagtggttggactgtggataaaaaacaacttcctcgaaacctaccatatgcccat
tccatggttttcaattttgattcttctcagttgatgatagccgggcatgatagaaaaatt
tatgttgtagatgtggtcaactcagaaataataaatgtattcactccttgcaatgatcca
catgatgaaggattgccacctagcgagcctcccattactaaaatgttcaccagttctgat
gggcaatggctagctgccatcaactgctttggagatgtatatattttcaatctggagata
atgagacagcactggtttatcgcaagactagatggtgcctctattacagctgggggtttt
cctccacttaataataatgtgcttatagttacaacttcttcaaatcaagtctatgcatta
gatgtggaggagaagaaattgggggattggtccaggcgaaattcacatgttctacctcga
agattccaggagtttcctggggaagtcattagtctatgtttcccaccatcaaaatcacca
actgtgattgtttatagtgccagggcactttgccggatagactttgggttgcccgtggat
caagaggatgaaagtgggatagtaaatggtcaggatggagcagtaaagagtttaggtcct
cctagtgggagtttgaaacgtaaactaagagactaccaaacgaaactccttggtagaaag
aatttcgactttgttagtttcagagaccctattttatttattggacccctttcgaataat
tctatcttgatcatagacaaaccttggatggaagtggttaaaaaccttgaagctccacca
atacacaaacacttatttgggacataa

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