Cannabis sativa (hemp): 115713889
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Entry
115713889 CDS
T08987
Name
(RefSeq) polygalacturonase-like isoform X1
Organism
csav
Cannabis sativa (hemp)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
115713889
NCBI-ProteinID:
XP_060970695
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Position
4:81709553..81712241
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AA seq
611 aa
AA seq
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MPQPQPKPALTPEPQPQPKPTPTPQPQPQPMPQPQPKPAPTPQSQPQPQPMPQPQPKPAP
TPQPQPQPMPQPQPQPKPAPQPKPTPTPQPQPQPMPQPQPKPAPTPQPQPQPMPQPQPKP
IPTPTPLPKPKPTPTPQPKPQPQPTPKPTPQTPQPQPTPQPRPQPQPQPRPTPQPPPQPK
PQPKPQPPSIQTPKIINVDDFGAKGNGQDDATAFERAWEEACSSNVTVTLMVPQNNNYLL
KPIVFQGPCKSNVTIQVSLLFNVILILHNEYSITNIINYIHIYIYYDDQIEGTIEASTDR
SDYSGAHERNWLMFQNVNNLIVEGGGTINGNGHLWWDLSCTTNKTPSCITRAPTGLSFVS
CNNLVVRNINVRDSQQMQVMFVNCNKVKAYNLTVTAPAHSPNTDGIHVTHSQDIEISNSV
IGTGDDCISIVSGSKNITATDITCGPGHGISIGSLGGGHSEAHVSDVFVRRAQFYETTNG
VRIKTWQGGVGDASNITFQDIEMHNVRNPIVIDQNYCARSTTPCQEQESAVQVRNVLYQN
IRGTSADEVAIKFDCSHSIECEGIVLEEIDLHIHSHRRSNRHNRGDGDTEAVCRNIHFTN
IGHVFPLCPNY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaccccaaccaaaaccagcactaacacctgagcctcaaccccaaccaaaacca
acaccaacaccccaacctcaacctcaacctatgcctcaaccgcaaccaaaaccagcacca
acacctcagtctcaacctcaacctcaacctatgcctcaaccccaaccaaaaccagcacca
acacctcagcctcaacctcagcctatgcctcaacctcaaccccaacctaaaccagcacct
caaccaaaaccaacaccaacacctcagcctcaacctcagcctatgcctcaaccccaacca
aaaccagcaccaacacctcagcctcaacctcagcctatgcctcaaccccaaccaaaacca
ataccaacaccaacacctctaccaaaaccaaaaccaacaccaacacctcaaccgaagccc
caacctcagcccacaccaaagccaacacctcaaactcctcagcctcagcccacacctcag
ccaagacctcaacctcaaccccaaccaaggccaacacctcaacctccacctcaaccaaag
cctcaacctaagccacaaccaccttcgatacaaacaccaaaaattattaacgttgatgat
tttggagcaaaagggaatggccaagatgacgcaacggcatttgagagagcatgggaagag
gcttgttcatccaacgttactgttactttaatggttcctcaaaataacaactatttgctt
aaaccaattgtctttcaaggcccctgtaaatcaaatgtgacaattcaagtgagtctttta
tttaacgttatattaattttacataatgaatatagcataaccaacattattaactatata
cacatatatatttattatgatgatcagattgagggaacaatagaagcatcaacagatcga
tcagactatagtggtgcacatgaaagaaattggcttatgttccaaaatgttaacaattta
atagttgaaggtggtggaaccattaatggcaatggacatctttggtgggatctctcttgc
accacaaacaaaacaccttcttgcatcactagagcaccaacgggtttgagttttgtgagt
tgtaataatttggttgtgagaaatataaatgtaagagactcacagcaaatgcaagtcatg
tttgtgaattgtaacaaagtcaaagcttacaatctgacagtgacagcaccagcccatagt
cccaatacagatgggatacatgtaacacattctcaagacattgaaatttccaattctgtt
attggaacaggtgatgattgtatttcaattgtgagtggatccaaaaatattacagctaca
gatataacatgtggaccaggtcatggaataagtattggaagtttgggaggtggacactca
gaagctcatgtttctgatgtatttgttcgtcgagctcaattttatgaaacaactaatgga
gttcgaattaagacttggcagggaggtgttggagacgcaagcaacattacatttcaagac
attgaaatgcataatgttcgaaatcccattgtaattgatcaaaactattgtgctcgtagt
actacaccgtgccaagaacaggagtctgcagtacaagtccgaaatgttttatatcaaaat
attagaggtacaagtgcagacgaagttgcaataaaattcgattgcagccatagcattgaa
tgtgaaggaattgttctagaagagatcgaccttcacattcatagtcaccgtcggagtaac
agacacaatagaggagatggagatactgaagctgtatgtagaaacatacacttcactaac
attggacacgtttttcctttgtgtcctaattattag
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