Cannabis sativa (hemp): 115713918
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Entry
115713918 CDS
T08987
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115713918
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csav04812
]
115713918
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115713918
Cytoskeleton proteins [BR:
csav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115713918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
Adaptin_N
TOR1L1_N
Cnd1
MMS19_C
INTS1_R4
HEAT_Maestro
UTP20
TPR_TTI1_C
Dopey_N
MMS19_N
V-ATPase_H_N
Sec7-like_HUS
TIP120
Motif
Other DBs
NCBI-GeneID:
115713918
NCBI-ProteinID:
XP_030498258
LinkDB
All DBs
Position
4:complement(80749011..80759630)
Genome browser
AA seq
1431 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLSSSEVTALVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGEHLKLHFNALVPSVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWAHKSWRVREEFARTVTSAIGLFSATELPLQRAILPPILQMLNDPNPGVREAAI
LCIEEMYTQAGTQFRDELHRHHLPSSMVKDINARLERIEPKVRSSDGHGNFPTGENKNMS
HNHKKSSPKAKSTAREVSLFGGDDVTEKPVEPIKVYSEKELIREMEKIASTLVPEKDWSV
RITAMQRVEALVYGGAVDYPCFRGLLKQLVGPLSVQLSDRRSTIVKQACHLLCFLSKELL
GDFEACAEVFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLSRIADSAKNDRNAV
LRARCCEYALLVLEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSSARMCYRLFSKTWP
ERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRERFTQPSAPSSLPGYGTSAIVAMDR
SSTLSSGTSLSSGLSQAKSLGKGTERSLESVLHSSKQKVSAIESMLRGLDLSDKHNSSTL
RSSSLDLGVEPPSARDPPFPAARSASNNLSNSLMTDSTAYATSKSSNRNGGLVLSDIITQ
IQASKDSGKLAYRSNASNETLPGFSSYTAKRAPERYQERSSAEEHEFREARRHMHERQYS
PHRDGNFRDSHNSNVPNFQRPLLRKHVAGRMSASRRRSFDESQLSVGEMSNYVEGPASLS
DALSEGLSSSSDWCARVAAFNYLRSLLQQGPRGVQEVVQNFEKVMKLFFQHLDDPHHKVA
QAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLDIVSKTYCTDSL
LPALLRSLDEQRSPKAKLAVIEFAIGSFNRYSANSEGYLNSGILKLWLSKLTPLVHDKNT
KLKEAAITCFISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNFLQSKK
ERQRPKSSYDASDAVGTSSDEGYGSVSKKSHFYGRYSSGSVDSENGRKWSSTQESSALVP
SNYGQVASDEFHENLYQNFDAGSNTDLNFKSKDSTYNSNSSGQNLASRTNVLESFDNNVN
LERSSTPRRDGQDLIGLDHTGLSESIGHDNEAASGLDVHDLKLKSAKASSVPESGPSIPQ
ILHLISNGAEENDGASKHGALQQLIEASVANDYSIWTKYFNQILTVVLEVLDDSDSTIRE
LSLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVSKVSNEAEHCLTIVLSQYDAFRCL
SVIVPLLVTEDEKTLVTSINCLTKLVGRLSQDELMTQLPSFLPALFEAFGNQSADVRKTV
VFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGSAIDANHA
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctcgaactcgcgcgagccaaagatacgaaggagcgaatggctggtgta
gagcgactccatcaactacttgaagcttctaggaagagtcttagttcgtcggaagtgact
gcgcttgttgattgttgtttggatcttcttaaggataataattttagagtttctcagggt
gctctgcaagctcttgcttctgctgctgtgctctctggtgagcacttgaaattgcacttc
aatgctcttgttccttctgttgttgaacgattgggggatgctaaacagccagttcgtgat
gctgctcggagactcttgctcactctcatggaggtttcttctccgaccatcatagtagaa
cgagcaggatcatatgcctgggcgcacaaaagttggagagttagagaagaattcgcgcgg
actgtcacttcagcaattggtcttttttcagctacggagctccctcttcagcgtgctata
cttcctccaattttgcagatgttgaatgatccaaatcctggtgtcagggaagcagctata
ttatgtatcgaggagatgtatacccaagctggcacccaattccgtgatgaactgcatcgc
caccatcttccatcatctatggtaaaagacattaatgccaggttggagagaattgaacct
aaagttcgttcttcagatggacatggtaacttccctacaggagaaaataaaaatatgagt
cacaaccacaagaaaagtagtccaaaggcaaagagcacggcaagagaagtgtcacttttt
ggaggagacgatgttactgagaaacctgtagaacctattaaagtttattcggagaaggaa
ttgataagagaaatggagaagattgcttctactcttgtgccagaaaaagattggtccgtc
cgtataactgctatgcaaagagttgaagcccttgtttatggaggtgctgttgactatcca
tgctttcgtggactattgaagcaacttgttggccctctgagcgtacaattatctgatcgg
aggtctaccatagtgaagcaggcttgccatctgctatgctttttgtcgaaggagctcttg
ggagattttgaggcatgtgcagaggtgtttattccggttcttttcaagctggttgtgatc
actgtacttgtaattgcagagtctgcagataactgcataaaaacgatgttgcgtaactgc
aaagttgcacgtgtgctttcacgtatagcagattctgctaagaatgaccgtaatgcagtg
ctccgtgcaaggtgttgtgaatatgcactattggtgttagaacactggcctgatgcccct
gaaatacaacggtcagctgatctttatgaagatcttataagatgttgtgttgcagatgca
atgagtgaggtacgctcatctgcaagaatgtgctacagattattttcaaagacctggccc
gagcgttcacggcgcttgttttcatcttttgatcctgtcattcaaaggttaatcaatgaa
gaggatgggggtatacataggcggcacgcttctccttctgttcgtgaaagattcacccag
ccatctgctccatcaagtttacctggttatggaacttctgcaattgttgctatggacaga
agttctactttatcttcaggaacatccctctcttctggactgtcacaagcaaagtctttg
ggcaaaggcactgagcgcagtttggaaagtgtgttgcactcaagcaaacagaaggtcagc
gctattgaaagcatgcttagaggtttggatttgtcagacaaacataattcttcaacactc
cgatcatctagtctggatctaggagttgaacctccatcagctcgtgatccaccattccct
gctgctcgctcagcttctaataatctctcaaactctttaatgacagattcaactgcatat
gctaccagtaaaagtagtaaccgcaatggtgggctggttttgtctgatattatcactcaa
attcaagcttccaaagattcaggtaaattggcgtatcgaagcaatgcctcaaatgaaact
ctgcctggattttcatcatatacagcaaagagggctcctgagagataccaagagcggagt
tctgctgaagaacatgagtttagggaggctagaagacatatgcatgagaggcagtattca
cctcacagagatggaaacttcagagattcacataacagtaatgttcctaatttccagagg
ccactcctgagaaagcatgttgctggacggatgtctgcaagcaggcggagaagttttgat
gagagccagctgtctgttggggaaatgtcaaattatgtagagggtcctgcttctctcagt
gatgccctaagtgagggcctgagttcatcttctgactggtgtgctagggttgctgcattc
aattatctccggtctttactgcagcaaggcccaaggggggttcaagaagtggtccaaaat
tttgagaaggtaatgaagttatttttccaacatctggatgatccccaccataaagttgcg
caggcagctctttcaactcttgcagatattattccatcttgccggaagccctttgagagt
tacatggaaagaattttgccccatgttttctcacgattaattgatcccaaggagttagtt
aggcaaccttgttcaacaactctggatattgtaagcaagacgtactgtacagattctctg
ttaccagctttgcttcggtctttagatgaacagcggtcacctaaggccaaactcgctgtt
atcgagtttgctattggctcctttaacaggtattcagctaattctgaaggctatctcaac
agcggcatcttaaaattgtggctttccaagttaacaccactggtccatgataaaaacact
aaacttaaggaggctgccataacctgctttatatctgtttactcccactttgattcaaca
gccgtcctgaatttcattctaagcttatcagttgaagaacaaaattccttaagacgggct
ctaaaacagtatactcctcgcatagaagtagacttgatgaactttttgcagagcaagaaa
gagcgccagcggcctaagtcctcgtatgatgcatctgatgctgttggaacatcttcagat
gaaggatatggtagtgtctcaaagaagagtcatttctatggaagatactcttctggttcc
gttgatagcgaaaatggtaggaaatggagttctacccaagaatcatcagccttggtacct
agcaactatggccaagtagcttccgatgaatttcatgagaacttgtatcagaattttgac
gctggctctaacactgatcttaattttaaatctaaggattcaacttacaacagtaattct
agtgggcagaacctggcctccaggaccaatgtgttggaaagttttgacaataatgtaaat
ttagagcgttcttcaactcctcgacgggatggtcaggatctgataggcttggatcatacg
ggactttctgaaagcattggacatgataatgaagctgcctctgggttggacgttcatgat
cttaaacttaaatctgcaaaggctagctcagtgccggaatcaggtcccagcattcctcaa
attcttcacttgatttccaatggagccgaggaaaacgatggtgcaagtaagcatggggca
cttcagcaattaattgaagcttctgtggcaaatgattactctatatggactaagtatttt
aatcagattttgaccgttgtccttgaggtgttggatgattctgattccacaattcgggaa
ctttctctttcattgattgttgaaatgcttaaaaaccagaaagatgcaatggaagactct
gttgagatcgtaattgagaagctgcttcatgttacaaaagatacagtttctaaggtgtca
aatgaagcagagcactgcctgactattgttttgtctcagtacgatgcattcagatgttta
agtgtgattgtgcctttgctggtaactgaagatgagaaaactcttgttactagcataaat
tgtcttacaaagcttgtgggacggttatcacaggacgaactaatgactcaattaccgtca
tttttgcctgctctctttgaagcttttggaaaccagagtgcagatgttcgtaagacggtt
gttttctgccttgtggatatatatatcatgctcgggaaagctttcttaccgtacttggag
gggctgaacagcacacaattgaggttggtgactatttatgctaatcgaatctcacaggcc
cgaacaggttcagccatagacgccaaccatgcttag
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