Cannabis sativa (hemp): 115713936
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Entry
115713936 CDS
T08987
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115713936
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
115713936
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_HPS5
TFIIIC_delta
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_LRRK2
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
115713936
NCBI-ProteinID:
XP_030498282
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Position
4:complement(983408..989467)
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AA seq
832 aa
AA seq
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MSNGGGGVGVKRVFIGAGCNRIVNNVSWGASDLVSFGAQNAVVIFSPKTAQILTTLPGHK
ASVNCTQWLPNAKFAFKAKHLERHYLLSGDADGTIILWELSLLEGKWRNVSQVPESHKKG
VTCITGIMVSESEAVFASTSSDGTVHIWEVTFPANIGGDCKLLCLDSLSVGSKPMVALSL
AELPGNNGRIVLAMGGLDNKIHLYCGGRSEKFVHACELKGHTDWIRCLDFSLPLYSNGKT
ETILLVSSSQDKGIRIWKIVLIGEKKEEISLASYIKGPVLVAGTLSYQVSLESLLIGHED
WVYSVEWQPPSASGDGGAYCQPQSILSASMDKTMMIWQPERTSGIWMNVVTVGELSHCAL
GFYGGHWSSNGDSILAHGYGGSFHLWRNVGVDLDNWQPQKVPSGHFAAVSDISWARNGEY
LLSVSHDQTTRIYAPWKNDASSDSDGWHEIARPQVHGHDINCVTIIRGKGNHRFVCGADE
KVARVFEAPLSFLKTLGHAISQHSIFEDIQTGVQVLGANMSALGLSQKPIYAQNENDNTS
SRVGSENIDTLETIPDAVPVVLTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCNHEGN
LVASSCKAQSATVAEIWLWEVGSWKVVGRLQSHSLTVTQMEFSHDDKFLLTISRDRQFSV
FAIKGAGTEEISHQLVARQEAHKRIIWACSWNPYGYEFATGSRDKTVKIWGLENQSSVKL
LITLPPFKSSVTALSWVGLDKNRNNGLLAVGLENGLIELWSLSINRTNDGAIGGAPAATV
APFAQLDPVMCHVSTVNRLAWRNPEKRDDECSLQLASCGADHCVRLFDVKVT
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatggcggcggcggagttggagtgaagagagtattcatcggagctggctgcaac
agaatagtcaacaacgtttcatggggtgcctctgatttagtatcctttggagctcaaaac
gccgtcgttatattctctccaaagactgctcagattttgactactcttccgggtcacaag
gcttctgttaattgcactcaatggcttcctaatgctaaatttgcttttaaagctaaacac
ttggagcggcattatctgctttctggggatgctgatggcaccattattttatgggaatta
tctcttcttgaaggaaagtggagaaatgtttcacaagtaccagaatcacacaagaaaggt
gtcacttgcattactggaattatggtttcggaatctgaagcagtctttgcatctacatct
tcggacggtacagtccacatatgggaggtgacttttcctgctaatattggaggtgactgt
aaattgttatgtctggattctctctctgttggttcaaaacctatggttgcgctttcttta
gctgaacttcctggaaataatgggcgtatagtattggcaatgggaggattggataacaaa
attcatctctactgtggcgggaggtctgaaaagtttgtccatgcttgtgagttgaaaggg
catacagattggatccggtgtttagatttctcgttacctttatattccaatggcaagaca
gaaactattctacttgtgagttcgtctcaggacaagggcatacggatatggaagattgta
ctgattggagaaaagaaagaagaaattagtttagcttcttatataaaaggtcctgtactt
gttgctggcacattgtcttatcaagtttctttggaatctctgctaattgggcacgaggat
tgggtatattcggtagaatggcaacccccgtctgcttctggagatgggggtgcctattgt
caaccccagagcattttatctgcatcaatggacaagacaatgatgatttggcaaccagag
aggacttcgggtatctggatgaatgttgtcactgtcggtgaattaagtcattgtgcattg
gggttttatggtggtcattggagctcgaatggagattccattttagctcatggatatggt
ggatcatttcatctctggagaaatgttggtgttgacttggataactggcagccacaaaaa
gttccatcagggcattttgctgcagtttcagatatttcgtgggcaaggaatggcgaatac
ttgctgtctgtcagtcatgatcagacaactcggatatatgctccttggaaaaatgatgct
tcttctgatagcgatggctggcatgaaatcgctcgcccccaagtccatggtcatgacata
aactgtgtcaccattattcgagggaaagggaaccaccgatttgtctgtggagctgatgaa
aaggttgcaagagtattcgaagctccgttgtcctttctaaagactctcggtcatgccatt
tcacagcatagtatttttgaagacatccaaaccggcgttcaggttttgggtgcaaacatg
tccgctcttgggctatcacaaaagcctatttacgctcagaatgagaacgacaacacatca
agcagagtcggtagtgagaacatagacacacttgaaactatccccgatgcagtccctgta
gtgttgactgaacccccaatagaagatcaactagcatggcatacactatggccagagtca
cacaagctctatggtcatggtaatgaacttttttcgttatgctgtaatcatgaaggaaat
cttgttgcctcgtcgtgtaaggcccagtctgcaacggtagcagagatatggctatgggaa
gttggttcatggaaggtggttggtcggttgcagtctcacagtttgacagtgactcagatg
gaattctcccacgatgacaaatttcttttgacaatttcaagagaccgacagttttctgtt
ttcgcgatcaaaggagcaggcacagaagaaataagtcaccagctagtagcaaggcaagaa
gcacacaagagaattatatgggcatgctcatggaacccatatggttacgaattcgcaacc
ggttcacgagacaagaccgtcaaaatttggggtcttgaaaatcaatcatcagtcaaactt
ctcataactttgccacccttcaaaagtagtgtcacagcattgtcttgggtcggtctcgac
aaaaacagaaacaacggtttactagcagttggattggaaaacggactcattgagctatgg
agtctatccataaaccgaactaacgatggcgctataggaggagcccccgctgcaactgtt
gcaccatttgcacagcttgatcctgtcatgtgtcacgtgtctacagtgaatcgtttagca
tggaggaaccccgagaaaagggacgacgaatgtagtttgcagcttgcctcttgtggtgcg
gatcactgcgtgagattgttcgatgtaaaggtaacttaa
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integrated database retrieval system