Cannabis sativa (hemp): 115714022
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Entry
115714022 CDS
T08987
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115714022
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115714022
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
90S particles
Helicases
115714022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
115714022
NCBI-ProteinID:
XP_030498391
LinkDB
All DBs
Position
4:complement(869813..874332)
Genome browser
AA seq
749 aa
AA seq
DB search
MRKPKSKSLRNQNRLSEVNEIQLLNSWIESQKPDSGSNPLALPPLRSGEPVGRIDGSLFS
RYSGVTMFDQLPISQKTKDGLKESKYIKMTDIQRAALPHALCGRDILGAAKTGSGKTLAF
IIPVLEKLYRERYNREDGVGSIILSPTRELANQTFDVLRSVGRHHNFSAGLLIGGHKDVD
MEKEHVNDMNILVCTPGRLLQHMDQTVNFDCSQLQVLILDEADRILDVGFKKAVNAIISQ
LPKKRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESDTATPTSLNQRAIIVPAEHKLD
MLWSFIKSNLNSKILVFFASRKQVTFVFEAFKKLRPGIPLKCLHGKMKQIKRMAIYSHFC
EEKRSVLFCTDVGSRGLDFNKAVNWVVQVDCPDDIKTYIHRVGRTARYDSCGKSVMFLLP
SEKTMLDKLREEKIPIKTYKVKLDRVQQVTGLLSALLVKYPELLPKAQRAVTTYVRSILK
NRDKEIFDVMKLPVDGFSASLGLPLTPKLRFLNQKIKKGNNIVGKPSLVEPEDSTDEDED
ELDLPGEELDISEFKTKEVDDTNVVLVDNTKIEDGSASKIADVVPPTRVLKKKKLKINVH
RPVGTRVVFDEEGNSLPPLARVAHMNGSDSALLDQEKKKEFYKNLREEMKLADKEDKLLE
RQRLQEKRTKEKMKRKGRLEDEEEDDGEDDSDEEESRKKKGAKRSKKYFDSESDDGEDNG
GKASINTDAISLQEQEALALKLLSSMNKI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcccaaatccaagtccttacgcaaccaaaacagactctcagaggttaacgaa
atccaacttctcaactcatggattgaatcgcagaagcctgattccggttccaacccatta
gctcttcctcctctccgctctggcgaacccgttggccgaatcgatggctcattattctcc
cgctactcgggagtaaccatgttcgaccagttgccgatttctcagaagacaaaggatggt
ttgaaggagtcaaaatacattaagatgactgatattcaaagagcggctttgcctcatgct
ctctgcggtagggacattctcggcgcggcgaaaaccggttccgggaaaactcttgcattt
attattccggttttggagaaactgtatcgcgagagatataaccgtgaggatggagttggc
agcattattctgtctcccacaagggaattagctaatcaaacttttgatgtattaagatca
gttggaaggcaccataattttagtgctggtcttctaattggtggtcacaaagatgtagac
atggagaaagagcatgtgaacgatatgaatatattggtctgcactcctggtcgtcttctt
caacacatggatcagactgtaaattttgattgctcacaacttcaggttttgatccttgat
gaggcagatcgcattcttgatgtcggttttaagaaagctgtaaatgccatcatttcacag
ctaccgaagaaaaggcaaacgtttctcttttctgcaactcaaacgaaatctgttcaagac
cttgcaagacttagtttaaaggatccagagtaccttagtgtgcatgaggagtctgataca
gccactcctacgagtttgaaccaacgagcaattattgttcctgcagaacataagttagac
atgttgtggagtttcataaagtcaaatcttaactctaagatcttagtgttcttcgcaagt
cgcaaacaggtaacatttgtctttgaagcgttcaaaaagctccgtcctggaatacccttg
aaatgtcttcatggaaaaatgaagcagataaaaagaatggctatatattctcatttctgt
gaggaaaaacgatctgttctgttctgcaccgatgtaggttcaagaggccttgattttaac
aaggctgttaactgggttgttcaggtggattgccctgatgacattaaaacttacatacat
agagttggtcggactgctcgatatgattcttgcgggaaatcagttatgtttcttttgcca
tcagaaaaaacaatgctcgataaattgcgagaagagaaaatacccataaaaacttataag
gtaaaactagacagagtgcaacaagttacggggctgttatcagctttgctagtcaagtat
ccagagttgctacctaaagctcaaagggctgtcacaacatatgtacggtctattcttaaa
aatcgagacaaagagattttcgatgtgatgaaactgccagttgatgggttttcagcatca
ttgggtcttccgttaactccaaaactgcgttttctaaatcaaaaaattaagaaagggaat
aatatagtaggaaaaccttctcttgtcgaaccagaagattctactgatgaggatgaggat
gaactcgatcttcctggagaagaacttgatatcagtgaattcaagacaaaggaagtggac
gacaccaatgtggttctcgtagacaacaccaaaattgaagatggttcagcaagcaaaatc
gcagatgtcgtaccaccgactagagtcttgaagaaaaagaagttgaagatcaatgtgcat
cgacccgtgggaaccagagttgtctttgatgaggagggcaactcattacctccacttgca
agggtagctcacatgaacggtagcgattcagcgctgcttgatcaagaaaagaagaaagaa
ttttacaaaaatttgagggaagagatgaagcttgcggacaaagaagacaagctcctcgaa
cgccagcgtctccaagaaaagagaactaaggagaagatgaaaagaaaaggtagactagaa
gatgaagaagaagatgatggcgaggacgactctgatgaagaagaatctaggaagaagaag
ggcgctaaaagatcgaagaagtacttcgatagcgagagtgatgacggagaagacaatggg
ggtaaagctagtatcaacactgacgcaatatcgttacaggagcaagaagctttggctctc
aaattgctaagctcgatgaacaaaatttaa
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