Cannabis sativa (hemp): 115714026
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Entry
115714026 CDS
T08987
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115714026
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115714026
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115714026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
Ski2_cyano_M
PhoH
DUF5930
Motif
Other DBs
NCBI-GeneID:
115714026
NCBI-ProteinID:
XP_030498398
LinkDB
All DBs
Position
4:complement(37436211..37442434)
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AA seq
1183 aa
AA seq
DB search
MTAISLSSILSSSHSSTRLYLHSSISKRLTTVSQTLAFCFPKSLPSHSPSSLRFRVSLKK
SRSSAFSVEPHLSDVDEEDDAFDDDDDEDEDDEDDVAAEEYEDGDISGDLSEGLDQSDDE
VDLSVAAAEDSSRPEDFRWQRVEKLQNEVREFGEEILDVDELASVYDFRIDKFQRLAIKA
FLNGSSVVVSAPTSSGKTLIAEAAAVATVARRRRLLYTTPLKALSNQKFREFRETFGDSN
VGLLTGDSSVNKDAQILIMTTEILRNMLYQSVGMVSSGHSLFHVDVIVLDEVHYLSDISR
GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGKIHGKTELVTSSKRPVPLTWHFSTK
TSLLPLLDETGTRMNRKCSLNYLQLNSSGIRSSRDASKRRNSRKHTSEFFDYDGTRSNNG
QPLSKNDINTIRRSQVPQITDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYLEDYNLLDEC
EASEVELALKRFRIQYPDAIRQTAVKGLRQGVAAHHAGCLPLWKSFIEELFQRGLVKVVF
ATETLAAGINMPARTAVIASLNKRSDSGRVHLTPNELLQMAGRAGRRGIDKKGHVVLVQT
PFEGAEECTKVLFSGLEPLVSQFTASYGMVLNLLAGAKVTRRANVSEDPNSFQKGRTLDE
ARKLVEQSFGNYVSSNVMLAAREEVTKIEKEIELLNSELTDDAIDRKSRKLLSEAAYKEI
TDLQEELRAEKRLRTELRRKMESQKIHSLKPLLEEFESGQLPFLCLQYKDSEGVQHAVPA
VYLGKVDSLEGSKLKNMVSTDEAFSLNNIKEKSGSDAEPSLEPSYYVALGSDNSWYLLTE
KWIKTVYKTGFPNVALAQGDALPREIMRKLLDKDDMKWEKLSGSEFGGVWCMEGSLETWS
WSLNVPVLNSLSENDELLHISEAYHGTVESYKQQRTKVSRLKKKISRTQGFKEYKKVIDM
TKLTEEKIKRLKLRSRRLTNRIEQIEPSGWKEFLQISNVIHESRALDINTHVIFPLGETA
ASIRGENELWLAMVLRNNILTELKPAQLAGVLASLVSEGIKVRPWKNNSYIYEATSVVVD
VISFLNEQRSSLVELQEKHGVNIVCSLDSQFSGMVEAWASGLTWREMMMDCAMDEGDLAR
LLRRTIDLLAQVPKLPDIDPVLQSNARIASEVMDRPPISELAG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatttctctctcttcaattttatcgtcgtcgcacagctccacgcgcctctac
ctccactcctccatttccaaacgtctaactactgtcagtcaaaccctagccttctgtttc
cctaaatcgcttccctcacattctccaagctcgttgcgattcagagtttcgttgaagaag
tctcggagctctgccttctctgttgaaccacacttatcggatgtggacgaagaagatgat
gcatttgatgatgatgatgatgaagacgaagacgacgaagacgatgttgccgccgaagaa
tatgaggatggtgatatttccggcgacttatcagaaggacttgaccagagtgacgatgag
gtcgatctctcagtggcggcagccgaggactcgagtcgacccgaggatttcaggtggcag
agagtcgagaagttgcaaaacgaagtcagagagttcggcgaggaaattttagatgtcgat
gagctcgcttccgtctacgatttccgaattgataaatttcagaggttggccataaaagcg
ttcctgaatggttcttccgtggtggtatctgcacctactagcagcgggaagactttgata
gcggaagctgcagcagttgctacagtagccaggagaaggagactgctctatacaacacct
ctcaaggccttatctaatcagaagtttcgtgaatttcgggagacattcggagacagcaat
gtcggcttgctcactggagattcttcagtgaacaaagatgctcagattttaatcatgaca
acggagatcttgcgcaacatgttgtaccagagtgtgggaatggtttcctctggacatagt
ctttttcatgttgatgtgattgtactagatgaagtccactatctaagtgatatatctcgt
ggtacggtgtgggaggagatagttatttactgcccaaaagaagtgcaactcatatgtcta
tcagcgactgtagcaaatccggatgagctggctggttggattggtaagattcacggtaaa
acagagttggtaacatcatcaaagcgaccagtacccttgacttggcatttctctacgaag
acatccttgttacctcttctcgacgagactggaacacgaatgaataggaagtgttcactc
aattacctacaacttaatagttcaggaataagatcttcccgagatgctagtaaacgaagg
aattcaagaaaacatacaagtgaattttttgattatgatggtactcgtagcaataatggt
caacctctttcaaagaacgacatcaatacaatacgccgttcccaagttcctcaaattacc
gatacactatggcaacttaagtccaaggatatgctgcctgcagtctggtttatttttagc
aggaaaggctgtgatgcagctgttcaataccttgaagattacaacctcttagatgaatgt
gaagcaagtgaggttgagctagccttgaagagatttcgcattcagtatcctgatgccatc
aggcaaactgctgtcaagggactacggcaaggagttgctgcacatcatgctggttgtcta
cctttgtggaagtcctttatagaagaacttttccagcgaggacttgttaaggtagtcttt
gctacagaaacactggctgctggaatcaacatgcctgctaggacagcagtcattgcatcc
ctcaacaaaaggagtgatagcggccgtgtccatttaaccccaaatgaacttctacaaatg
gctggacgcgctggacgtaggggcattgacaaaaagggtcacgttgttcttgttcagact
ccctttgaaggcgctgaagaatgcaccaaggttctgttttctggacttgaacctcttgta
tcacagtttacagcttcctatggaatggttttaaatcttcttgctggtgcaaaagtcacc
cgcagagcaaatgtatcagaagatccaaattccttccaaaaagggaggactttggatgaa
gctaggaagttggtcgagcaaagttttggaaactatgttagcagtaatgtaatgcttgcc
gcaagagaagaggtaactaaaatcgagaaagagattgaattgcttaattctgaacttact
gacgatgctatagacagaaaaagtaggaagcttctatcagaggcagcatacaaggagatt
acagatctgcaggaagaactgagggccgaaaaacgattaaggactgaactacgaaggaag
atggaatcacagaagattcattctctgaaacctctattagaggagtttgaaagtggacaa
ctaccctttctatgtctccaatacaaggattcagaaggagttcaacatgctgttcctgct
gtttatttagggaaggtagactcactagagggttcaaaacttaagaatatggtatctacc
gatgaggctttttcattaaacaacataaaagaaaagtctggttctgacgctgaaccaagt
ttagagccatcatattatgtggctcttggctcagataattcatggtatctattaacagaa
aagtggattaagacggtatataagacgggtttcccaaatgttgctttagctcagggggat
gctttgccacgggaaattatgaggaagcttcttgataaggatgacatgaaatgggagaag
ctttcaggttctgaatttggtggtgtatggtgcatggaaggatctctggagacatggtcg
tggagtttgaacgtgccggttttaaacagtctttcagaaaatgatgagctattacacata
tcagaagcataccatggcactgtggaatcctacaaacaacaaagaaccaaagtttcacgt
ttgaagaagaagatatcacgcacacaagggtttaaagaatacaaaaaagtcattgacatg
acgaagctgacggaggagaagatcaagcgtttgaagcttagatcaagacgtttgacaaat
agaatagagcagattgaaccatctgggtggaaggagttcttacaaataagcaatgtcata
cacgagtctcgggcattagatataaacacccatgttatattcccgctcggtgagacagca
gcctcaattcgaggtgagaatgaactatggctagcaatggttctccggaataacatttta
acggaactaaagccggcacaactggctggagttctagctagtttagtctctgaagggatt
aaagttcgtccctggaaaaacaacagctatatatacgaagcaacatcagttgtagtggac
gtaataagctttttaaacgagcaaagaagctcactggtagagctacaagaaaaacatgga
gtgaatattgtgtgtagtttggatagccaattttcgggaatggttgaagcttgggcttct
gggctgacttggagagaaatgatgatggattgtgcaatggatgagggtgatctggcccgt
ctcttgcgacggactattgatttgttggcccaagttcccaagttgcccgatattgacccg
gtcctccagagtaatgctcggattgcgtctgaggtcatggaccgtcctcccataagtgaa
ctcgctggataa
DBGET
integrated database retrieval system
