Cannabis sativa (hemp): 115714102
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Entry
115714102 CDS
T08987
Name
(RefSeq) histone acetyltransferase GCN5 isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115714102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115714102
03036 Chromosome and associated proteins [BR:
csav03036
]
115714102
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
115714102
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115714102
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
115714102
HAT complexes
PCAF complex
115714102
STAGA complex
115714102
TFTC complex
115714102
SAGA complex
115714102
SLIK complex
115714102
ADA-HAT complex
115714102
HAT-A2 complex
115714102
ATAC complex
115714102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
115714102
NCBI-ProteinID:
XP_030498501
LinkDB
All DBs
Position
4:complement(82708284..82712620)
Genome browser
AA seq
541 aa
AA seq
DB search
MENHSSHVTAPNRSRSSQSPSPSHSASASATSSIHNKRKLPPDDHAPPFSTDARDGALTS
NDDLDSISARGGAADSDSDDDSDDVAVDDDDDFDNDSMRNFTAARLDSTTRNTKMKTEAA
TVKIENSDNSKDAGAAPGTAAGGPGANATTAQGIVVKEDATKIFTENLQTSGAYSAREES
LKREEEAGKLKFACYSNDGIDEHMVWLIGLKNIFGRQLPNMPKEYIVRLVMDRSHKSVMV
IRRNHVVGGITYRPYVSQRFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLT
YADNNAVGYFIKQGFTKEIHLEKDRWHGYIKDYDGGILMECKIDPKLPYIDLSTMIRRQR
QAIDEKIRELSNCHIVYPGIDFIKKEAGIPKKPVKAEDIPGLRDAGWTPDQYGYSRVGIL
SASTENGRKHLTAFMRSLVKSMHDHVDAWPFKEPVDARDVPDYYDIIKDPMDLRTLSKRV
ESEQYYVTLEMFIADVKRMFVNARTYNSPETIYYKCSTRLETHFQSKVQSGLQAGTKIQQ
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccactcctctcacgtcaccgcccccaaccgttctcggagctcccaatctccc
tcaccttcccactccgcctccgcctcagccacctcctccatccacaacaagcgcaagctt
ccccccgacgaccacgctcctcccttctccaccgatgcaagagacggcgccctcacctcc
aacgacgatctcgacagtatctctgcccgaggcggcgccgcagattccgactccgacgat
gactccgacgatgtcgccgttgacgacgatgacgacttcgataacgattccatgcgcaat
ttcactgctgcacgcctcgacagcaccacacgcaataccaagatgaagactgaggctgcg
actgtcaaaattgagaattccgacaattctaaagacgctggtgctgctcctggcaccgct
gccggtggtccaggcgccaacgccaccacagctcagggaattgtggtcaaagaagacgcc
accaaaatatttacggaaaatttgcagaccagtggtgcttatagtgctagagaggaaagt
ttgaaaagagaggaggaagctggaaaactcaagtttgcttgctattcaaacgatggtatt
gatgagcacatggtctggttaattggtttgaaaaatatttttgggaggcaactaccaaac
atgcccaaagagtacattgttcgtcttgttatggatagaagccacaaatctgttatggtt
attagacgcaatcatgttgttggtggcatcacctatcgaccatatgtcagccaaaggttt
ggggaaattgctttctgtgcaatcacggctgatgaacaagttaaaggctatggtactagg
ctgatgaatcatttaaaacaacatgcgcgagatgttgatgggctaactcattttctgaca
tatgctgacaataatgctgttggctattttattaagcagggttttaccaaggagattcac
ttggagaaagatcggtggcatgggtacataaaagattatgatggaggaatccttatggaa
tgcaaaattgatccgaagcttccatacattgacttgtcaactatgattcgccgccagaga
caggcgattgatgaaaagataagagagctctccaactgtcacattgtgtatccagggatt
gactttataaagaaagaagctggaattcctaagaaacctgtcaaagctgaggacattcct
ggtttacgggatgcaggctggacacctgaccaatatggctattcacgagttggtattttg
agtgcttcaacagaaaatgggagaaagcatttgactgcattcatgcgctcacttgtgaag
tctatgcatgaccatgttgatgcgtggccattcaaagagccagtcgatgcacgtgacgtt
cctgattattatgacattatcaaagatccaatggatctaaggactttgtcaaagagggta
gagtcagagcaatattacgttacactagagatgttcattgcggatgtgaagaggatgttc
gtcaatgcacgcacctacaattctcccgagactatttattacaaatgttcaacaaggctg
gaaactcattttcaaagcaaagttcaatcaggtctccaagctggtactaaaattcagcag
cagtga
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