Cannabis sativa (hemp): 115714188
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Entry
115714188 CDS
T08987
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115714188
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
115714188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
115714188
NCBI-ProteinID:
XP_030498624
LinkDB
All DBs
Position
4:2678953..2692801
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AA seq
1602 aa
AA seq
DB search
MDQNQRPSSASRAYQFHPGRATIITLFDLYLGKSSRQKPDDQFREPPNKTQKRVVALNRE
LAPRNEQFLSDFEQIQSQFSDQEQLRAVTESVLISLVVHCSGHVPRAEFLLFALRSLCSI
GYINWDTFLPSLLSSVSTAETTLGQGSQTVASVSSQPAVLPSSNAISNSSNFQSSNPASP
LPSVHGIGSPVQSSLEPAPGANLSPIKSSDISCVIQQSSSRVNSSIRDNAISSLRQLCCK
IILAGLEFNLKPVTLADIFTHMLNWLVNWDQRQQGINGSDGFKSWKLDKALIEWLHSCLD
VIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHL
HCPTFGTQRIFSQIIPNSPGEPVAGLRYSPITYPSVLGEPLHGEDIATSIQKGSLDWERA
LRCIRHAFRTTPSPDWWKRVLVVAPCHKPQAQAPTPGAVFSSEMICEGTVERFVELLKLT
NSDINCWQEWRVFSDIFYFLIKSGCIDFVDFVDKLVLRLTEGGDHHILRTNHVTLLIAEI
IRVELVINALNNDARKVETTRKIMSFHREDRSSDPNTPHGILLDFISSCQNLRIWSLNTS
TREYLNSEQLQKGKQIDEWWRQSSKGDRMMDYMNMDDRSIGMFWVVTYTMAQPACETVMN
WLSSAGVTELLPGSSLQANDRLMVMREVSPLPMSLLSGFSMNMCLKLAYQMEESLFSGQV
VPSIALAETYTRLLLLAPHSLFRSHFSNLAQRNPSVLSKPGVTLLLLELMNYRLLPLYRY
QTKCKALMYDITKIISALKGKRGEHRTFRLAENLCMNLILSLRDFFLVKREGKGPTEFTE
TLNRITVITYAIMIKTRGIADADHLLYLQTMVEQIMGASQHTWSEKTLRHFPSVLRDAVI
GRLDKRSLAIQAWQQEETTVLNQCTQLLSPSADPTYVMTYINHSFPQHRHYLCAGAWILM
QGHPENINSGNLARVLREFSPEEVTANIYTMIDVLLHHIQLELQHGHSLQDLLLKACSNL
AFFVWIHELLPLDILLLALIDRDDDPHALRIVIALLDRQELQQRVKLYCMNRGPSEHWLY
SGIYKRNDLQKALGTHLSWKDRYPTFFDDIAARLLPVIPLIVYRLIENDAIDSADRILAM
YSPFLAYHPLRFSFVRDILAYFYGHLPGKLIVRILNVLDLNKIPFTESFPQHISSANPVM
CPPLDYFATLLLGLVNNVIPPLHSSSKSGSLGENSSTLLRKNQATSQSGQSNASDSQRAF
YQIQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQVIVNIQATLVQSNGLHGTPNSVG
QGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNMVSRSGYSSQQLSCLMIQACGLLLAQL
PPDFHIQLYIETSRIIKETWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVA
LLHSVFSNLPQEWLEGTHIIIKHLRPVTSVAMLRIVFRIMGPLLPRLANAHSLFSKTLSL
LLSTMVDVFGNNAQPSNPAEASEIIDLIDFLHHVVHYEGQGGPVQSSSKPRPEVLAIFGR
VLETLHPDVQHLLSHLRPDINCSIYAATHPKLAQNPSQNSLT
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatcagagaccttcctcagcttcaagggcttaccagttccacccaggccga
gccaccattatcactctctttgacctatatttaggaaaaagtagtcgccaaaaacctgat
gatcaatttcgagaacctcctaacaagacacaaaagcgtgtagtcgcgcttaatcgagag
ctagctcctagaaatgagcagttcctttcggattttgaacaaattcagagccagttttct
gatcaagaacagctgcgagctgtgacagaatctgttcttatatctttggttgtgcattgt
agtggacatgtaccgcgagcagaatttcttctctttgctttacgtagcttgtgcagtatt
ggttatattaactgggacacttttttgccatcacttctttcttcagtttctactgcagaa
acgactttgggtcaggggagtcaaacagttgcttcagtttcatcacagcctgcggtgctt
ccatcgtcgaatgcaatctccaattcatctaattttcagtcttcaaatcctgcctctcca
ttaccttctgtgcatggtatcgggtctcctgttcaatcatctttagaaccagctcctggt
gcaaatttatcaccaatcaaatcatctgatatttcctgtgtgatacaacagtcttcatca
agggtgaattcatctataagggataatgctattagcagtctacggcaactctgttgcaag
attatcttagctggtcttgaatttaaccttaaaccagtgactcttgctgacatttttact
catatgctgaattggctggtgaattgggatcagagacaacaggggattaatggatctgat
ggtttcaaatcgtggaaacttgacaaggctttaatagagtggctgcatagctgcttggat
gtaatttggcttttggttgaggaggataaatgtcgagttcccttttacgagttactgcgc
agtggcttgcagtttatagaaaatatacctgacgatgaagccttgtttacgcttattttg
gagatccataggaggcgagatatgatggctatgcacatgcaaatgttagatcaacacctt
cattgccctacatttggaactcaacggattttttcacagattattcccaatagtccaggt
gaaccagtagcaggcttgagatattcaccaattacatatccaagtgtacttggagaacca
ttgcatggagaggatattgcaacttccattcagaaaggaagtttggactgggagagagct
ttgcgttgtataagacatgcatttcgcaccactccatctcccgattggtggaagcgtgtg
ttggttgtcgctccttgccataagcctcaagctcaagcacctactccgggtgctgttttc
agttctgaaatgatttgtgagggaacagttgaaagatttgttgagctcttgaagcttact
aattcagatatcaattgctggcaagagtggcgtgttttttcggatatattctactttctt
attaaaagtgggtgcattgactttgttgattttgtggacaaattagttttacgtctcaca
gagggaggtgaccaccatattcttagaacaaatcacgtgacgttgctaatagcagaaatt
atccgagttgagcttgtgatcaatgctttgaataatgatgctagaaaggtggagacgaca
agaaagattatgtcttttcatagagaagataggagttctgaccctaatactcctcatggg
atcttgcttgactttataagcagttgccagaatttgcgcatttggtcattaaacacatct
accagagaatatttaaacagcgagcagcttcagaaaggaaaacaaatagatgaatggtgg
aggcagtcaagcaaaggagaccgtatgatggattatatgaatatggatgataggtctatt
ggaatgttctgggttgtgacttacaccatggcgcaaccagcttgtgaaacagtaatgaat
tggctgtcttcggctggagttacagaactattaccaggatcaagcctacaggcaaatgac
aggttaatggttatgcgggaagtaagtccactgccaatgtcactgttatcgggcttctcc
atgaacatgtgtttgaagctggcatatcaaatggaagaatcattgttttctggacaggtt
gtaccaagcattgcactggctgaaacttatacacgactactgcttcttgcaccacattcc
ttatttcgctctcatttcagtaatttagcgcaaaggaacccatcagtattgagcaagcct
ggggttactcttttgttgcttgaattgatgaactaccgtttgcttccactttacaggtac
caaaccaaatgcaaagccttaatgtacgatattacgaaaataatttctgcactcaaaggg
aaacgtggagaacatcgtacatttaggttggctgaaaacttgtgcatgaaccttattttg
tccttgagggactttttcttggtgaaaagagaagggaagggtccaactgaatttacagaa
acattgaaccgaataactgtcattacttatgctattatgattaaaacgcgtggaattgct
gatgctgatcacctgctttatcttcaaaccatggttgaacaaataatgggagctagtcag
catacatggtctgaaaaaacactgcgccatttcccatctgtccttcgtgatgctgtgatt
ggccgattggataagaggagccttgcaattcaagcatggcaacaggaagaaaccactgtg
cttaatcaatgcactcaacttctttctccatcagctgatcctacatatgtaatgacctat
atcaatcatagttttcctcaacatcgacactacctatgtgctggtgcgtggatactgatg
caagggcatcctgaaaatattaacagtggtaacttggcacgcgtcttgagagagttttcc
cctgaagaggtgacagcaaacatctacacaatgatagatgtgctacttcaccacattcag
ttggaacttcagcatggacactccttacaggatcttttactgaaagcttgttcaaacctg
gcattttttgtttggatccacgaattacttcctttggatattttgcttttggcacttatt
gaccgtgatgatgatcctcacgctttgcgtatcgtgattgctctgcttgataggcaagaa
cttcaacaaagagtgaaattatactgtatgaatcgcggaccttctgagcattggctttat
tcgggaatttacaagagaaatgatttgcaaaaggccttggggactcatctttcttggaag
gacaggtatcccacattcttcgatgatattgccgcacgtttacttccagtcattccgtta
atagtttatagacttattgaaaatgatgccattgactcagcggatcgaattctggccatg
tattcaccatttcttgcttatcaccccctaagattttcatttgttcgtgacattcttgca
tatttctatggccatcttcctggaaagctcatagttcgaatcctgaatgtacttgatcta
aacaagatcccatttacggaatcatttccacaacatatcagctcagcaaatcctgttatg
tgcccacctcttgattattttgcaactcttttgctgggactagtaaataatgttataccc
ccattacatagcagctcaaaatcaggatcactgggtgagaattctagtactttgttgcgc
aagaaccaggcaacatctcagtctgggcaatcaaatgcttctgatagccaaagagctttt
tatcaaatccaagatcctggcacatatactcaattggtccttgaaacagcagtgattgag
attctctctctcccagtatctgcatcccaaattgtatcgtcacttgtacaagttattgtt
aatattcaagcaacacttgttcaatccaacggactgcatggaacaccaaatagtgttgga
caaggctcagtcttaccaacctcaccttccgggggaagcacagattcattgggagcaagc
agatctactccttcagtttcaggaataaatacctcaaacatggtctccagaagtggttat
agcagtcaacaactgtcttgcttaatgattcaagcttgtggtctgttgttggcccaactt
cctcctgattttcacatacaactttatatagagacatcaagaattataaaagaaacttgg
tggcttactgatgggaagagatcacttggagaactagactccgctgttggctacgcctta
ttagatccaacatgggctgctcaagataatacctcaacagcaataggtaacatagttgct
ttgcttcattcggttttcagtaaccttccacaggaatggctggaagggacccacatcatc
atcaaacatctcaggccagtgacatctgttgcaatgctgagaatagtgttccgcataatg
ggtccattgctcccgagacttgccaatgctcactcgctttttagtaagaccctttcattg
ctgctgagtacaatggtggatgtcttcggaaacaatgcacaaccatcaaacccggctgaa
gcatcagaaataatagatctaattgactttcttcatcatgttgttcattatgaagggcag
ggagggcctgtgcaatctagtagcaagcctcgacccgaagttttggccatttttggaaga
gtattggaaactctacatcccgatgtacaacatcttctttcccacttgagaccggatata
aactgttcgatttatgctgctactcatcctaagctggcccagaatccatcacaaaactct
cttacctaa
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integrated database retrieval system
