Cannabis sativa (hemp): 115714253
Help
Entry
115714253 CDS
T08987
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115714253
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115714253
Surveillance factors
Other surveillance factors
115714253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
MRP-S23
Motif
Other DBs
NCBI-GeneID:
115714253
NCBI-ProteinID:
XP_060969259
LinkDB
All DBs
Position
4:11539552..11547140
Genome browser
AA seq
1438 aa
AA seq
DB search
MADRKFDLPDVILPSNSKPPDHSCTSKLETSGESGEEKMHCGLLDESKESSIPLSPQWLY
AKPTESKMELRPSSSLGNSTESNLKDVWRLEEDKKDRKRINTDGESSRRWREEERETSLL
GGRRERKKVERRDNSSMRETTDNRALPTSERWNDGRNSAHETRRDNKWSSRWGPEDKDKE
ARNEKRTDVEKEDTHSESQTTVGSNRPTAERDLDSRDKWRPRHRMEVHPSGSATYRAAPG
FGLERGKVEGSNLGFARGRGRPNVAGRSSCIGTASTTCSDRTESVPGKLRYSADRFYYPR
GKLLDLYRQNQLDPSFVTMPNEMEDSPPITEVGLVEPLAFLAPDAAEEATLSNIWKGKIT
SSGVVSNSYENGRSTENMTGVGDLESVDGAVDILPLTLVGETNNTMQKFANGDSTLVEEC
IGIGSGVHFGGECHSTFQHDISTNKQKFDSSFTSNSCVDNIGSVDSDVSSKLSNNQGSHH
ILSFTEDAHNVNTTIEANRLDKDVLPEDLCLCYLDPQGMIQGPYLGVDIISWFEQGFFGT
DLPVRLEDAPEGTPFQDLGEVMPHLKAWDGQGYNINQNLEIEEPGSLGVTLGTNLPSAPA
SGLGASSIGNEPSPSLPEFNSLPDELVQLRISEAEDPQLPHFKGQSFDGFDGQDEEILFP
VRPMNTGFATAKSPVNPHDGLASCGSHIPPSLPEYTEPGLQNQAETKMHPFGLLWSELEG
AQTNYAQASSVSSSMGRTASFGGMADPALVSDSWPDYGRNQRSDPNLYQDKMAAHSLSRM
ERGPSHLDLTDQLMSQQLQQQKLQQRNMLSTFPQLNESFFEHLPNQSLIHPQQLANISAP
ELDHLMKTLQLQQHRQLQLQQQQQQQYQMQQQQFIQKQKLLQEQQQSHARQLSLEQLMHS
RMHEPGFVQPHLDPLRANNVLDQVLLEQHLLNQLQQQSHHTPRHVDPSLEQLIRAKLCQT
PQQEHPRDLYDALSSAQHGHRQSLEQQMLQQELLQARQMSMGLRQRASLEEERHVNSVWP
TDESNQFLWAHAGSHRAHSSGISPLDNYKQRQRSSHEEQVGHLERNLFVQEQLQQGVYEP
GSLPFELSMSYPQGASGMNLDAVNAMARAYGLDMHESSARMKSSNQVGPFPAGVQSVGPQ
HPLINNQFQVPRMDGIENSWSEKNGQLENFFVDSRFRQSHIAAERQKRESEAKIVCEDSN
LWLSDDEKSKRLLELLNQKSGNYIPELMDVGTKSSFERELLGSHYAKSSSSEVPFTLPSD
GEAKLNNSFGVGIFGLSQSEPTQEVNTDSGVSSLHKQQLELQGLKGEGMMKGQEFERQQR
MVEQAGLEALDHERSMNALSRHSSLGVTDGSAAIYHNKCGASNSFLDDAAKDRALLIKGQ
ESILLRRPPVPRTPSSQDGLSELASDPVSRGKNSSSMPDGMLISVNYVFSLTCNMRND
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaaagttcgatctacccgacgttatccttccctctaattcaaaaccgccc
gatcactcctgcacttccaaacttgaaacatctggagaaagtggtgaggaaaagatgcat
tgtgggttacttgacgagtccaaagaaagcagcatacctttgtctccccagtggctttat
gccaaaccaactgagtcgaagatggaattacgcccttcaagttcactaggaaactccaca
gaaagcaaccttaaggatgtttggcgtttggaagaggacaaaaaggaccgaaagcgcatt
aacactgatggtgaaagtagtcgccgctggcgtgaagaagaaagagaaactagcttactt
ggtggtagaagagagcgcaagaaagtggagcgccgagacaattcttcaatgagagaaact
actgacaatagagcattacctacttctgagcgatggaatgatggccgtaactccgcacat
gaaaccagacgcgacaacaaatggtcgtctaggtggggtcctgaagacaaagataaggaa
gcacgaaatgaaaagagaacagatgtggagaaggaagatactcactccgaaagccaaact
actgtgggtagcaaccgtcccactgctgagcgtgacttagattctcgtgacaaatggagg
ccacgccatagaatggaagttcaccccagtggttcagctacatatcgtgctgcacctgga
tttgggcttgaaagaggaaaggtggaaggttcaaatttaggatttgcccggggacgagga
aggccaaatgttgctggaagatcatcttgtataggcacagctagcactacttgttctgac
agaacagaaagtgttcccggaaagttaaggtactcagctgataggttttactatccaagg
ggtaagcttcttgacctttatcgtcagaatcagcttgatccatcttttgttacaatgcca
aatgagatggaggactcacctcctataacagaagtagggttggttgaaccattggctttt
cttgccccagatgcagctgaggaggccacccttagcaatatatggaagggaaagataaca
agtagtggtgtggtgtctaattcatatgaaaatgggagatcaactgaaaatatgacaggt
gttggagatcttgaatctgtagatggagctgtggacattctgcccttaacccttgttggg
gagactaataataccatgcaaaagtttgcaaatggtgatagtactttggtagaagaatgt
attggtattggaagtggtgtacattttggcggtgaatgccatagcacatttcagcatgat
atcagtacaaataaacagaagttcgattcttcttttaccagcaattcttgtgtggacaac
attggttctgttgattctgacgttagttccaagctgtctaacaatcaaggttctcaccat
attttgtcttttactgaggacgctcacaatgtgaacactaccattgaggcaaacagattg
gataaggatgtcttacctgaagatttatgcttgtgttaccttgatcctcaaggaatgatt
cagggaccatatctgggggttgacatcatctcatggtttgagcaaggtttctttggaact
gacttaccagttcgcctggaagatgcacctgaaggaacaccttttcaagatttgggtgag
gtcatgccacatctaaaagcatgggatggacaggggtataatattaatcagaacctggag
atagaagaacctggatctttaggagtaactttggggactaatttaccttctgctcctgct
tctggattaggcgcctcatctattggaaatgaacccagcccatccttacctgagttcaac
agcctcccagatgagcttgttcagctaagaatatccgaggctgaagatccacaactgccg
cattttaaaggtcaaagctttgacggttttgatggacaagatgaagaaatcttgtttcca
gtaagaccaatgaacactggctttgcaacagcaaaatctcctgtcaaccctcacgatggt
ttggcaagttgtggtagccacattcctccctccttgcctgaatatacagaacctggcttg
caaaatcaagctgaaactaagatgcatccttttggcttgctgtggtctgagctggaaggt
gctcaaacaaactatgcacaggcatccagtgtttcttctagcatgggcaggactgcttcc
tttggtggtatggctgatccagctcttgtttccgactcttggcctgattatgggagaaac
caacgttctgatcccaacctgtatcaagataagatggctgctcacagtttgtcacgcatg
gaacgcggacccagccatcttgatttaactgatcagctgatgtcacaacagttgcagcaa
cagaagctccagcagagaaatatgttgtctacattcccacaattaaatgagtcattcttc
gaacatttgcctaatcaaagtcttattcatccccaacaattggctaacatttctgcacca
gaactagatcatcttatgaagacacttcagctgcaacagcaccgacagcttcagctccag
cagcagcagcagcagcaatatcagatgcagcaacaacaatttattcagaagcaaaagctt
ttgcaagaacaacagcaatctcatgcacgacaactgtctcttgaacagttgatgcatagt
cgaatgcatgaacctggttttgtacagccacatcttgatcctctgagagccaataatgtt
ctagatcaagtacttttagagcagcaccttttaaatcaactccaacaacagtctcatcac
acacctaggcatgtagatccatctctagagcagctcattcgagcaaagctttgtcagact
ccacagcaagaacatccaagagatttatatgatgcactatctagtgcgcagcatggacat
cggcaatctttggaacaacagatgcttcagcaggagctgctgcaagcaaggcagatgtcg
atgggattgaggcagcgagcaagtttggaagaagagaggcatgttaattcagtttggcca
actgatgagtctaatcaattcttatgggcccatgctggtagtcaccgagctcactcttct
ggaattagtcctttagacaattataagcagcgacagaggtcatctcatgaagagcaggtg
ggccatctcgaacggaatctttttgttcaagagcaacttcagcaaggggtttatgaacct
ggctcattgccatttgagttgtcaatgtcttatcctcagggtgcttcaggaatgaatttg
gatgctgttaatgccatggctcgggcttatggtttggatatgcatgagtcaagtgcacga
atgaaatcttcaaatcaagtgggaccatttcctgctggagttcaaagtgttggtcctcag
caccctttaattaataatcaatttcaggttccacgaatggatggaattgagaacagttgg
tctgagaagaatgggcagctagagaatttcttcgttgattctcggtttcgacaatcgcat
attgctgcagagcgacagaaaagggagtctgaagccaaaattgtttgtgaggattctaat
ttatggttgtcagatgatgagaagtcaaagagattattggagttgcttaatcaaaaatca
ggcaattatattcctgaattgatggatgttggtactaaatcatcctttgagagagagtta
ttaggaagccattatgccaagtcaagctcatcagaagtaccatttactttgccttcagat
ggagaagctaaattaaataattcatttggggtgggcatttttggtttgagtcaaagtgaa
ccaacacaagaagtgaacactgattctggagtatcctctctgcacaaacagcagctggag
ttgcaaggattgaaaggtgagggtatgatgaaaggtcaggaattcgagagacaacaaagg
atggtggagcaagcagggttggaagctctagatcatgagagatcgatgaatgccttgagc
aggcattcttcccttggggttactgatgggagtgcagccatttaccataacaagtgtggt
gcttctaattcatttttggacgatgctgcaaaagatagggcattattgatcaaagggcaa
gaaagtattctgttgagacgacctcctgtgccccgtacgccctcatcgcaggatggcttg
tctgagctagcatctgatccagtttctaggggaaaaaattcttcaagcatgcccgatggt
atgttgatatctgtcaattatgtgtttagtttgacttgtaacatgaggaatgattag
DBGET
integrated database retrieval system
