Cannabis sativa (hemp): 115714666
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Entry
115714666 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115714666
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
csav03015
mRNA surveillance pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115714666
09122 Translation
03013 Nucleocytoplasmic transport
115714666
03015 mRNA surveillance pathway
115714666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115714666
03041 Spliceosome [BR:
csav03041
]
115714666
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115714666
Spliceosome [BR:
csav03041
]
Complex C
Other components
EJC/TREX
115714666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
115714666
NCBI-ProteinID:
XP_030499278
UniProt:
A0A803PD37
LinkDB
All DBs
Position
4:39553059..39558053
Genome browser
AA seq
753 aa
AA seq
DB search
MSSPRSSPYQILDNRPIDQWKVTELKEELKKRKLITRGLKEDLVKRLDEAVRTERISAQN
DNDDNDIQSSPEPAVVVKSGKEKAVFSENVGTVDGSGKKTSKVDKLPVEDDINNSVPDLG
QGNIEEGYVVVGEDSSAVEETVVSYETTVETTVTVTESVVSDVTLSEQDSEIQKEKGSFK
FQLENEDSKFQLENVDSKSQLENVDSKSQLEIEDAKAELDSELLKPQVENDDSKPQLDSA
GSKAKVESKDSKTQLEINNTMSQLENECSKPTSEEFKLDVSAPENQVSEVRPNFGSQVKY
DSISTDSVSINEKIELKDNIIADNVKLELDVIKPEMVAPSSSTNVQGGGDSHLMDVEEPH
ESNTSVEEKDDNNGTNADLGKKNDNLDVGYSEKLNLDRSSGDDSMEEDVLESKQIDSKYS
SDDVGDKSEKTEVSDMKEEGHVDIVGDDFSADGKDVHVESEERPSAHAEKRKINDESVVG
NNEPVKRQRRWNTDSLTIPEPQSSNITTTTPKDAFQSSALKRLARADSITSEDSPMERVV
PPSPKSPTTSLRIDRFLRPFTLKAVQELLGKTGNVTSFWMDHIKTHCYVTYSSVEEAIET
RNAVYNLQWPPNGGRLLLAEFVDPQEVKTRLETPPTPVASANAAHVASPKATPVPSIPLA
AQPQQSPRQTRQQPQLAPPPSLPPPPPLSNPPQARERLPLPPPPPLPEKLDPPIVTLDDL
FRKTKATPRIYYLPLSEEQVATKLAAQGKRVMQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacctcgatcatcgccgtatcagattcttgacaatcgaccgattgatcagtgg
aaggttacagagttaaaagaagagcttaagaagagaaaattgataactagaggtttgaag
gaggatttggtaaaacgcttggacgaagcagtgcgtactgagaggataagtgctcagaat
gacaatgatgataatgatattcaatccagtccagaaccagcagttgtagtgaaaagtggg
aaggaaaaggctgttttttctgaaaacgtaggcactgtggatggtagtgggaagaagacc
agtaaggtggataagcttcctgttgaggatgacattaataacagtgtaccagacttgggc
caaggtaatattgaggaaggatatgttgtagttggtgaggattcctctgcggtggaggag
actgtggttagttatgaaactactgtagaaactacagttacggttactgagagtgtggta
tctgatgtaacattaagtgagcaagattctgagattcagaaagagaaggggagttttaag
tttcagctggagaatgaggattcaaagttccagctggagaatgtggattcaaaatctcag
ctggagaatgtggattcaaagtcccagctggagattgaggatgcaaaggccgagctggat
agtgagcttttaaagccccaggtagagaatgatgactcaaagccccagttagatagtgct
ggctccaaggccaaggtagagagtaaagactcaaagacccagctggaaatcaacaataca
atgtcacagctggagaatgagtgttccaagcctacatccgaggaattcaagctcgacgtt
tctgctccagaaaaccaggtatctgaggtcagacctaattttgggtctcaagtaaaatat
gattctatttctactgattctgtgtctattaatgaaaagattgaacttaaggataacata
attgctgataatgtcaaattagaattagatgttattaagccggagatggtggcaccatca
tccagcactaatgttcagggcggtggtgactcacatcttatggatgttgaagagccacat
gagagcaacacttctgtcgaagagaaggatgacaataatggtactaatgcagatttgggg
aagaaaaatgataatctagatgtggggtactctgaaaagttaaatttagacagaagttct
ggagatgattctatggaagaagatgtgctggagagtaaacaaattgattccaagtatagt
tcggatgatgtgggagataagagtgaaaaaactgaagtttctgatatgaaggaggaaggt
catgtggatattgtgggtgatgatttttctgcagacggaaaggacgttcatgttgagagt
gaagagcgtccatctgcacatgctgagaaaagaaagattaatgatgaatcagttgttgga
aacaatgagcctgtgaaaaggcagcggcggtggaatactgatagcttaacaattccggag
cctcaaagctctaatattactaccactacacccaaggatgcgttccaatcctctgctttg
aagcgccttgctagagcagattcaatcactagtgaggattcacctatggaacgtgttgtc
ccaccatcaccaaaatctccaaccacttctctaaggattgatcggtttctgcggcccttc
accttgaaagcagtgcaagagcttttgggaaaaactggcaatgtaaccagtttctggatg
gatcacattaagacccattgctatgttacctattcatcagtggaagaagccattgaaaca
cgcaatgctgtatataacctgcagtggcctccaaatggtgggcggcttctccttgctgaa
tttgtcgaccctcaggaagtaaaaactcggttggagactccaccaactcctgtagcttct
gctaatgcagctcatgttgcatctcccaaggcaactcctgttccttctatcccattggcc
gcgcagccccagcagtcccctcggcaaactaggcagcagccgcagcttgcacccccgcct
tccctccctccaccaccacccttgtctaatcctccccaagcaagagaaaggcttcctctt
ccaccgccaccaccactgccagaaaagcttgaccctccaattgtcacattagatgacctc
tttcgaaaaaccaaggccactcctcgaatctactacttacctttgtcggaagaacaagta
gccacaaaacttgcagctcaagggaaacgtgtgatgcagtag
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