Cannabis sativa (hemp): 115714787
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Entry
115714787 CDS
T08987
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115714787
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115714787
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115714787
NCBI-ProteinID:
XP_030499400
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Position
4:80520522..80525257
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AA seq
453 aa
AA seq
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MAISLRCFSLCSFTIFLLILIVSVKASTTQKNDEVVQSRKLVTQELQSLKNSSMVESLDD
NNDEDTWNNEHAVENPEEIASMVDMNIRNHTERRKLGYFSCGTGNPIDDCWRCDRRWHLR
RKHLANCAIGFGRNAVGGRDGKYYVVNNPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDM
VITLKQELLMNSFKTIDARGVNVHIAYGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSS
PSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAIMGSTALTISNNYFTHHNEV
ILLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAN
PTINSQGNRYLAPVNPFAKEVTKRVDTDTGSWKHWNWRSEGDLLLNGAYFTPSGAGAASS
YARASSLGAKSSSLIPSLTSGAGVLNCRTGVQC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctttgagatgtttctctctttgttcattcacgatctttcttcttattcta
attgttagtgtgaaagcttcaacaacacagaaaaatgatgaagttgtacagtcaaggaaa
ttagtaacccaagagttgcagagtttgaagaattcatcaatggtggaaagtttggatgat
aataatgatgaagatacttggaataatgaacacgcagttgaaaatccagaagaaattgct
tctatggttgatatgaatatccgcaatcacacggaaagaaggaaattgggatatttctca
tgtggaacagggaatccaatcgacgactgctggcgttgcgaccgccgttggcacttacgg
cgtaaacacctagccaattgcgccattggtttcggtcgtaacgccgttggtggccgtgac
ggtaagtactacgtcgtcaacaaccctcgcgacgatgaccctgttaacccaagacccgga
acactccgtcacgctgtcatccaagatagaccattgtggattgtgttcaaaagagacatg
gtcatcacactcaaacaagagcttttaatgaatagctttaagaccattgatgcaagaggt
gtgaatgttcatattgcttatggtgcttgtattactatccaatttgtgaccaatgtaatt
attcatggtctacatattcatgattgtaaacccactggtaatgccatggttagaagctca
ccaagtcattatggttggaggacaatggctgatggagatgccatatccatttttggatca
agtcatatttggattgatcataattctctgtctaactgtgctgatggtcttgtggatgct
ataatgggctccactgcacttaccatttctaacaactacttcactcatcacaatgaggtc
atactattaggacacagtgattcttacacaagagacaaacaaatgcaagtgaccattgct
tacaatcattttggtgagggacttatccagagaatgccaagatgtagacacgggtatttc
cacgtggtaaacaatgactacacacattgggagatgtatgctattggtggtagtgctaac
cccaccattaacagccaaggcaacagatatcttgcccctgttaacccttttgccaaggag
gttacaaagagagttgatacagacactggttcatggaagcattggaattggagatcagaa
ggagatctattactgaatggagcttatttcactccatcaggagctggagctgcttccagc
tatgccagagcctcaagtttaggggctaagtcctcttccttgattccctcacttacttct
ggtgctggtgttcttaactgccgtactggagtacaatgttaa
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