Cannabis sativa (hemp): 115714817
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Entry
115714817 CDS
T08987
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115714817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115714817
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115714817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Nup54_C
Motif
Other DBs
NCBI-GeneID:
115714817
NCBI-ProteinID:
XP_030499443
UniProt:
A0A7J6G7H1
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Position
4:complement(8900370..8905196)
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AA seq
408 aa
AA seq
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MFGSQSSTPAFGTPSSAPAFGAQSSTPAFATPSSTPAFGTPSSTPAFGTPSSTPAFGTPS
SGSLFGTASSAPAFGSSSTPSFNTGFGSLLSTPFTSQTQAQQSSLFQQQTPLFQQQTQSA
GGFGFQTPFSTPQTSFFPNSQLTTQMAPVAPIPFSLADRDIQAIVEAYKEDPGNPKYSFK
HLLFSVTDAQFRVKPAGVSDIMWAEAMRKLEGMESTDRERLWPQLVHGFKDLSQRLKLQD
EVIVSDAERLRMTQSNVKMLQRHFQADTLPRIQRMRQKEQGLQRRLLKVMKIMEALEGKG
CRLPLTKGEAELAEKLAAIARQLKGSGTELSRRVQNLLTISRVQECSIIGGGSVYLPGST
KIHDRSLADMQEVLQQQTEAIARLGNVLKRDMRDMEIIMAEDTDMIDD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatctcagtcttcaacaccggcctttggcactccgtcttcagctccggccttc
ggcgctcagtcttcaactccagccttcgccactccgtcttcaaccccagccttcggtact
ccatcttcaaccccggccttcggcactccatcttcgactccggcttttggaacaccatca
tcgggttcgcttttcggtaccgcgtcttcggctccagcctttgggtcttcgtcgacgcct
tctttcaacactggcttcggttcgttgctctcgactccctttacttcgcaaactcaggct
cagcagagctcattgtttcaacagcagaccccgttgtttcagcagcagacacagtcggcc
ggtggttttggttttcagacacctttctcgacgcctcaaacttctttttttcctaattcg
caattgactactcaaatggctcctgttgctcctatcccgttctctctcgctgatcgtgac
attcaagcaattgttgaggcgtacaaggaggatcctggaaaccctaaatattcttttaag
catttgctgttcagtgtaaccgatgcccagtttagagtgaagcctgccggtgtatcggat
attatgtgggcagaggctatgagaaagctcgagggtatggaaagtacagatcgagaacgg
ttatggcctcagcttgttcatggtttcaaggatctttcacaacgcttaaagctccaagat
gaagtaattgtttcagatgctgagagattgagaatgactcaaagcaatgtgaagatgctt
caaagacattttcaagcagacacccttccaagaatccaaagaatgagacaaaaagagcaa
ggtcttcaaagacgccttttaaaggtaatgaaaataatggaggcattggagggaaagggt
tgtcgtctgcctttaacgaaaggggaagctgaacttgcggagaaattagctgcaattgct
agacagttaaaaggatctggtacagagctttctagaagggtacaaaatctactcaccata
tcccgtgtccaagaatgttctattataggtggtggttctgtctatcttccaggatcaacg
aaaatacatgaccggagtcttgctgatatgcaagaggtcttacaacaacagactgaagcg
attgctagacttggcaatgttttgaagagagatatgagggacatggagattataatggcc
gaggacacagatatgatagatgattaa
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