Entry |
|
Name |
(RefSeq) transcription factor SPATULA isoform X1
|
KO |
K28361 | transcription factor SPT/ALC |
|
Organism |
csav Cannabis sativa (hemp)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csav00001]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115714981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:csav03000]
115714981
Transcription factors [BR:csav03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115714981
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:73236888..73240224
|
AA seq |
398 aa
MGDMYDKSICSSSSAPDEISLFLQQILVRSSSSSMNTQFSLTSPGNNLSRMCPSSQMVGD
GISAVDSSGAYFVGNNSINNTSGGVAVIAPNNVSSSSVGASENENDEYDCESEEGLEALA
EDVPAKSVMGRGSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEA
IEYLKQLQLQVQMLAMRNGLSLHPVSLPAALNPAHLSHMRSDFGEENRSLPLNMTGTFPM
NQETSTPSLYSIPNQCTSSNQQLVPDMLNILNSEVTVGMESQVQAHIGASFQLQTSAQEI
SRENRLHPHQHTSLNQLERSPSEFDMGAMATVTSFNRQASVLKGNDSLETCSLEGDWSEG
GLLKALEQSLLLPTHLNSMRTGRSCSNDNSIKAERANL |
NT seq |
1197 nt +upstreamnt +downstreamnt
atgggggatatgtatgacaaaagcatttgctcatcatcttcggcacccgacgaaatttcg
ctttttctacagcagattttggtacggtcttcttcttcatcaatgaatacgcagttttcg
ttgacgtctcccggtaataatctgagccgtatgtgtccgtcgtcgcagatggtcggagat
gggatctcggccgttgattcttccggtgcttatttcgtgggaaataatagtataaataat
acgagtggcggcgtggcggtcatagctcctaataatgtgtcgtcttcttcggtgggagct
agtgagaatgagaacgatgagtatgattgtgagagtgaggagggtttggaagcattggcg
gaagatgttccagcaaaaagtgtaatgggtcgaggttcctcgaagagaagcagagccgcc
gaagttcataacttgtctgaaaagagaaggaggagtaggattaatgagaaaatgaaagca
ttacagaatctaattccaaattctaacaagacggacaaggcttcaatgctggatgaagcc
attgagtatctcaagcagcttcaacttcaagtacagatgttagcaatgagaaatggattg
agtttgcatccagtaagtctacctgcagcactgaatcctgctcatctctcccatatgaga
agtgactttggtgaggaaaatagatctctacctctgaacatgacagggacatttcctatg
aatcaagaaacttcaaccccaagtctatattctattccaaatcaatgcacttcctcaaac
cagcaactggtaccggacatgttaaatatacttaactcagaagtcacagttgggatggaa
tcacaagttcaggctcacataggggcctcttttcaattgcaaacatctgctcaggaaata
tccagagaaaacagactccatccccaccaacatacaagccttaatcagttagagagaagt
ccttcagagtttgacatgggagccatggctacagtgacttcattcaatagacaagcatcg
gtcttgaagggcaatgattctttagaaacttgttctcttgaaggagattggtcagaaggt
gggttacttaaggctctagaacaaagtctattacttcccacccatttgaatagcatgagg
acaggtagatcttgctcaaatgacaacagcatcaaggctgaaagggcaaacctatga |