Cannabis sativa (hemp): 115715026
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Entry
115715026 CDS
T08987
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115715026
Enzymes [BR:
csav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115715026
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115715026
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
DUF1687
Motif
Other DBs
NCBI-GeneID:
115715026
NCBI-ProteinID:
XP_030499671
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Position
4:78711279..78715412
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AA seq
615 aa
AA seq
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MKIVTYNVNGLRPRISQYGSLLKLLDSFDADIICFQETKLRRQELTADLVMAEGYESFFS
CTRTSERGRTGYSGVVTFCRVNSAFSSTEVALPLAAEEGFTGVLGNPRLVATGLEEFEKD
DLVKVDGEGRCVMTDHGHFVLFNLYGPRAQCDDAERNEFKLKFYKILQKRWESLLCGGRR
IIVVGDLNIAPTSLDRCEAGPDFENNEFRRWFRSMLVENGGAFFDAFREKHPDRREAYTC
WSQSTGAEEFNYGSRIDHILCAGPCLHQEQDQKGHNFVTCHFEECDILTQYKRWKPGNTL
RWKAGQRIKLEGSDHAPVYTSLLQLPDIPKHSTPSLSARYMPMVYGIQQTLVSTLMKRQV
AKEIKLSEVSSSIPDGDIILGSCADRDKRTFGLCDVADVPSGNLCSSSSQGSEVLISTGD
KIPRVADDKVASITSITPGSKYIRSMSNNELKKKAKKNQQSQLSIMSFFRKTSVVSNGAG
VDSSTNQEDSFEPSDLSNEPLLGDSQTKNLSQSDSPQQIELESSEPTLDQIEVITCSSEK
NSAALLEWQRIQQRMQNSIPLCKGHKEPCVARIVKKQGPNFGRRFYCCVRAEGPASNPEA
NCGYFKWAASKSRRK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacctataacgtgaatggcctgagaccacgaatctcacaatacggttct
ctgctcaaacttctggactccttcgacgccgacatcatatgcttccaggagaccaagctc
cgaaggcaggaactcaccgccgatttggtaatggcggagggttacgagtcgttcttttcc
tgtactcgaacctccgaacgaggccgaactggctattccggtgttgttactttttgccgt
gtgaattcggcgttttcgagtactgaagtggcgttgccattggcggcagaggaaggtttt
actggtgttcttggaaatcctcgtttggttgctactggactcgaggagtttgagaaagat
gatcttgttaaggttgatggtgaaggtcgttgtgttatgactgatcatggtcattttgtt
ctgttcaatttgtatgggcctcgagctcaatgtgatgatgcagaaaggaacgaatttaag
ctcaaattctacaagatattgcagaaaagatgggagtctttgctgtgtgggggaaggaga
ataattgttgttggtgatctaaacattgcacccacttctttagatcgctgtgaagcagga
ccagattttgaaaacaacgaattcagaagatggtttcgatccatgttagtggaaaatgga
ggcgctttctttgatgctttcagagaaaaacaccctgatagaagggaagcatacacatgc
tggtctcagagtacaggtgcagaagaattcaattatggatcaagaattgaccatattcta
tgtgctggaccatgcttgcaccaagagcaggaccagaaaggccacaactttgtaacttgc
cactttgaggagtgtgacatattgacacagtataaacgatggaaaccgggaaatacactc
agatggaaagcaggacagcgcatcaagctagaaggctcggatcatgctcctgtttataca
agtttactgcaactacctgacatccctaaacacagcaccccatctttatctgcccgatac
atgcctatggtttatggtatccagcaaactcttgtgtccaccttaatgaaaagacaagtt
gcaaaagaaattaagctttccgaagtatcaagttcaattccagatggagacattattctt
ggaagctgtgctgatagagataaaagaacttttggtctatgtgatgtagctgatgtaccc
tccggaaacctttgttcttcttcaagccaaggatctgaagttctcatttcgacaggagat
aagatcccaagagttgctgatgacaaagttgcttctattacctcaattacaccagggagt
aaatacatcagatcaatgtctaataacgagcttaagaaaaaagcgaagaaaaatcagcag
tcccaactctcaattatgtcattttttcgtaaaacttcagtcgttagcaatggtgctggt
gtagatagttcaactaatcaggaagatagttttgagcctagtgatctgtcaaatgagcct
ctgttgggggatagtcagacaaagaacctcagtcagagtgatagtcctcagcagattgag
ttggagtcaagtgaaccaactttggatcagattgaagtgattacttgctcttcagagaag
aatagtgctgccctacttgagtggcaaaggatacagcagaggatgcagaatagcatccct
ctttgcaagggtcataaagaaccttgtgttgctagaattgtgaagaaacaaggaccaaat
tttggtcgccgattttattgttgcgtacgagctgagggacctgcatctaatcctgaagca
aattgtggttattttaaatgggctgcttcaaaatcacggcgaaaatga
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