Cannabis sativa (hemp): 115715174
Help
Entry
115715174 CDS
T08987
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115715174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115715174
03036 Chromosome and associated proteins [BR:
csav03036
]
115715174
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115715174
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115715174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115715174
NCBI-ProteinID:
XP_030499862
LinkDB
All DBs
Position
4:82352575..82359874
Genome browser
AA seq
1030 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGSPSVFGQNNNAANNPFAPKPFGSTTPFGSQTGSSVFGGTSTGV
FGAATQSSPFSSTTAFGASPSPAFGSSTPAFGASSTPAFGASSSSFGGSSVFGQKPAFGA
FGSTPTQTSPFGSTAQPSQPAFGSSLFGSSTPFGGSSQPAFGSTSTPAFGSSTPAFGATS
TPAFGATSTPAFGATSSTPAFGATSSPAFGATSTQAFGATSSPAFGATSTPAFGSTGSTF
GVSSTPLFGSGGAFGASSTPAFGASSTPAFGASSTPAFGASTTPAFGASSGQSFSFASSP
AFGQSTSAFGSSPFGASSSPFGAQSSTFGSQSTTPTFGSTSFGQQPAFGGQQVGSRVAPY
TPTPEPDSGGSGTNATVGKLESISAMAVYKDKSHEELRWEDYQKGDKGGPLSAASQPPVM
NFSTPASQPSSLTPSPFGQSSSSLFSTSTSTNMFGQKAPSAFNSTGFTTSSNTFSSSPNL
FTSTSAAPSAFGTTTSSLFAPNSSPSLFSSSSSAFTPSAFGAQGQASAPQFNSGLFNSTP
PGQTNTAFGQSTSSFGQNTTPAFPQTNIFNNQSSAFPNAFSSTPAPSTNTLGFGQTAPSF
SSAFTMNQPSQQVGSGGFGAFPMMQPSNANTGILGNNSANLSAPQSSPILQPAPSNPFGT
LPALPQMSIGNGGTSPSVQYGISSMPVLDKPAPVRISSLLTTRHLSQRRIRLPTRKYHPK
TDGVKVAFFSDDEETVSTPKADALFLPRDNPRALVIRPAEQWPLKSSAEKSFARKDTSPV
HENGKLSEEAYQAPNSNFENNNKDSVENGPSAPEKAKVKSLKQNGVHDEHSTHKGDSYKT
LSGHRAGEAAIVYEHGADIEAQMPKLRRSDYYTEPRIQELAAKERAEPGFCCRVKDFVVG
RHGFGSIKFLGETDVRRLDLESLVQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKC
FDKKTGRQYTEGPRIEKYKEMLKRKAEDQGAEFLSYDPIKGEWKFRVSHFSVYKLMEEDE
DGIYVHGTNL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactaacccttttgggcagtcatctagtagcccatttggttctccatca
gtttttgggcagaacaacaatgccgctaacaatccttttgctcccaaaccttttggtagc
acaactccctttggctcccaaacagggagttctgtttttggaggcacttcaacgggtgtt
tttggtgctgctacgcaatcgtcacccttttcttccaccactgcctttggtgcttcacct
tcaccagcttttggaagttcaacaccagcttttggagcttcttctacacctgcgtttggt
gcttcatcgtcgtcatttggtggatcttctgtatttggtcaaaagcctgcttttggagca
tttgggtccactcctactcaaacaagtccttttggaagcacagctcaaccatcacagcct
gcatttgggagcagtttatttggttcctccacaccttttggtggttccagtcaacctgcg
ttcggttctacgagcacccctgcctttggctctagcacacctgcttttggtgctacgagc
actcctgcttttggtgctaccagtacacctgcttttggtgccactagtagcaccccagcc
tttggtgctactagttcaccagccttcggcgctacaagcacccaagcgtttggtgctaca
agttccccagcatttggtgcgacatctactccagcttttggtagcactgggtctacattt
ggcgtttcaagtacgcctttgtttggctctgggggtgcctttggtgcttcaagcactcct
gcctttggtgcctcgagcactcctgcatttggtgcctcaagcactccagcctttggtgct
tcaaccactcctgcctttggggcttctagtggtcagtccttcagctttgcatcctcacct
gcttttggccaatcaacttctgcctttggcagcagcccttttggtgcgtcttcttctcct
tttggtgcccagagttcaacctttggatcccagtcaaccacaccaacatttgggagcact
agctttgggcagcaaccagccttcggtggtcagcaagtggggagtagagttgcaccttat
acaccaacacctgaaccagattctggcggtagtggtaccaatgcaactgttgggaaatta
gagtcaatatcagctatggctgtttacaaggataaaagccatgaagaattgagatgggaa
gactatcagaagggagataaaggtggacctctttctgctgcctctcagcctcctgtgatg
aactttagcactcctgcttcacaaccaagttctttgactccttcaccatttggccaatca
tcttcaagtctgttttctacctcaacttctaccaacatgtttggtcaaaaagctccttca
gcctttaatagtacaggttttacaacctcatctaacacattcagctcatcaccaaacctt
ttcacctcaacttcggcagcaccttctgcgtttggaacaacaacatcgtctctatttgca
cccaattcatctccatctttgttttcatcaagctcatctgcttttacaccatcagcgttt
ggtgctcaaggtcaagcatcagctccacaatttaattctggcctttttaattctactcca
cctggtcaaacgaacactgcttttggacagtctacctcctcttttggccagaatacaact
cccgcttttccacagacaaatatatttaataatcagtccagtgcgtttcctaatgccttc
tcaagcacacctgcaccctcaacaaacactttgggtttcgggcaaacagctccatctttc
tcttcggcttttacaatgaatcagccatctcaacaagttggttcaggagggtttggtgcc
tttcctatgatgcagccatccaatgcaaacactggaatcttgggtaataactctgcaaat
ttgtctgcccctcaaagctcccccattcttcaaccggcaccttctaatcccttcggaaca
ctccctgcattgccacaaatgtcaattggaaatggaggaacctcaccatcagttcaatat
ggaatatctagcatgcctgtactagacaaacctgctcctgttaggatatcgtcgttactg
actactcgacacttatcacaaaggcgtatcaggctgcctactcgaaaatatcatccaaaa
actgatggtgtaaaggttgcatttttcagtgatgatgaagaaaccgtcagcacaccaaaa
gcagatgctttatttcttccaagagataaccccagagcacttgttattcgtcctgctgag
cagtggcccttaaagtctagtgctgagaaatcatttgcaagaaaggatacatccccagta
cacgagaatgggaaattatctgaggaagcttatcaggcacccaactccaactttgagaac
aataataaagattctgtggaaaatggtccttctgctccggagaaagccaaagtgaagagc
ctgaaacagaatggagtgcacgatgagcattctactcacaagggggattcttataagacc
cttagcgggcacagagctggtgaggctgctattgtgtacgagcacggtgcagatattgag
gctcaaatgccaaagctcaggcgctctgattactacaccgagccacgaatccaagaactt
gctgccaaggaaagggccgaaccaggattctgctgccgtgtcaaggactttgttgttgga
cgacacggtttcggtagcatcaaatttttgggcgaaacagatgtgaggcggcttgatctc
gagtccttagttcagtttaacaatcgagaagtgattgtttatatggacgagagcaagaaa
cctcctgtgggtcaaggtcttaataagcctgctgaggttacgctccttaacatcaagtgc
tttgacaaaaagaccgggcgtcaatatactgaaggcccaaggattgagaaatacaaagag
atgctgaagaggaaggcggaggatcaaggcgctgagtttctttcgtacgatcctataaaa
ggagagtggaagtttcgggtgagtcacttcagtgtatacaagttgatggaggaagacgaa
gatggcatttatgtgcacggtaccaacctctga
DBGET
integrated database retrieval system
