Cannabis sativa (hemp): 115715699
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Entry
115715699 CDS
T08987
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00061
Fatty acid biosynthesis
csav00071
Fatty acid degradation
csav01100
Metabolic pathways
csav01212
Fatty acid metabolism
csav04146
Peroxisome
Module
csav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115715699
00071 Fatty acid degradation
115715699
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115715699
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csav01004
]
115715699
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115715699
Enzymes [BR:
csav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115715699
Lipid biosynthesis proteins [BR:
csav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115715699
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of breast milk
115715699
Exosomal proteins of breast cancer cells
115715699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115715699
NCBI-ProteinID:
XP_030500223
LinkDB
All DBs
Position
5:complement(75141059..75147426)
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AA seq
662 aa
AA seq
DB search
MAQKKFIFEVEKAKEAKDGRPSMGPVYRSMYAKDGFPPPIDGLDCCWDVFRLSVERNPGN
KMLGRREVVDGKAGKYVWQTYKEVYDCVIKLGNAMRSCGFGEGDKCGIYGANCSEWIMSM
QACNAHGLYCVPLYDTLGANAIEFVIKHAEVTIAFAEEKKLPELLKTLPNTTDYLKTLVS
FGKVTPEQRESVEKFGLKIYSWEEFLQLGDCKDFDLPVKKKTDICTIMYTSGTTGDPKGV
LISNESIISLLAGVRRLLESVNEKLTEKDVFLSYLPLAHIFDRVIEELFILHGASIGFWR
GDVKLLLEDIGELKPTIFCAVPRVLDRVYAGLTQKISAGGFLKKTLFNFAYSRKYNNMRK
GLKHGDAAPLCDKIVFSKVKQGLGGNVRLILSGAAPLAPHVEAYLRVVTCAHVLQGYGLT
ETCAGTFVSIPNELPMLGTVGPPVPNVDVCLESVPEMGYDALAEVPRGEVCVKGSTLFSG
YYKREDLTKEVMIDGWFHTGDVGEWQADGSLKIIDRKKNIFKLSQGEYVAVENLENIYGL
VSDIDSIWVYGNSFESFLVAVINPNQQALERWAGENNISGDFKSICENPRAKEYILGELN
KIGKEKKLKGFEFIRAVHLDPEAFDIERDLITPTYKKKRPQLLKYYQSVIDNMYKEGNKP
RT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagaagtttatttttgaggttgaaaaggctaaggaagctaaggatggaagg
ccttccatgggacctgtttatcgaagtatgtacgccaaggatggctttcctcctccgatt
gatggattggattgttgttgggatgtgtttaggctttctgtggagagaaatcctggaaac
aaaatgcttggtcgccgggaggttgtggatgggaaggctggaaagtatgtttggcaaact
tataaggaggtttatgattgtgtgataaaacttggaaatgccatgcgcagttgtggtttc
ggagaaggagacaaatgtggtatctatggtgccaattgttctgaatggattatgagcatg
caggcttgcaatgctcatggactctattgtgttccgttgtatgacaccttaggtgctaat
gcaattgagtttgtcataaaacatgccgaggttacaattgcttttgcagaagagaaaaag
cttcctgagctgttgaaaacacttcctaacaccacagactatttaaaaacacttgtgagc
tttgggaaggtcacaccggaacaaagggaatctgttgaaaagtttggattgaagatctat
tcctgggaagagttcttgcaattgggtgattgtaaagatttcgatcttccagtgaaaaag
aaaactgatatatgcactataatgtatactagtggaactactggtgacccaaaaggagta
ctgatatccaatgagagcatcatttctcttttggctggggtgaggcgattgcttgagagt
gtaaatgaaaagttgaccgagaaagatgtatttctttcatatcttccccttgcacatatc
ttcgatcgggtgattgaggagttatttattttgcatggtgcctcaatcgggttctggcgt
ggcgatgtcaaattattacttgaagacattggggagctaaaaccaactattttctgtgcc
gttccccgtgtgctggatagagtctatgctggtttgacgcagaagatttctgctggggga
ttcttaaagaagactctcttcaatttcgcatactcacgcaagtataataacatgcgaaag
gggcttaaacacggggacgcagctccattatgtgacaaaattgtatttagtaaggtgaag
caaggtttgggaggtaatgtgcggcttattctgtctggagctgcgcctctagctcctcat
gttgaagcttacttacgagttgtgacatgtgctcatgttttgcaaggatatgggctaact
gaaacttgtgcggggacatttgtctcgataccaaatgaactaccaatgctcggtacagtt
ggtcctccagtacccaatgttgatgtatgtctggaatcagttccggaaatgggatatgat
gcccttgcagaagtaccgcgtggagaagtatgtgtgaagggaagcaccttattctctggg
tactacaaacgtgaagacttaaccaaggaggtcatgattgatgggtggttccatacaggt
gatgttggtgagtggcaagcagatggaagcttgaaaatcattgaccgtaagaaaaatatt
ttcaaactttctcaaggagaatatgtggcagttgagaacttagagaacatttatggtctt
gtttctgacattgactcaatatgggtttacgggaacagcttcgagtccttcctcgttgct
gtgattaacccgaaccagcaagcacttgaacgttgggccggagagaataatatatctggt
gacttcaagtccatttgtgaaaatccaagagcaaaggaatacatcttgggagagctcaat
aagattggcaaagagaaaaagttgaaaggttttgagttcataagagctgttcaccttgac
ccagaggcatttgacatagaacgtgaccttattactccaacatataagaaaaagagaccc
cagttgctcaaatactaccagagtgttattgataacatgtacaaggaaggaaacaagccc
aggacctga
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