Cannabis sativa (hemp): 115716012
Help
Entry
115716012 CDS
T08987
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115716012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115716012
Ion channels [BR:
csav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115716012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
115716012
NCBI-ProteinID:
XP_030500561
UniProt:
A0AB40EBW9
LinkDB
All DBs
Position
5:complement(5298336..5303705)
Genome browser
AA seq
713 aa
AA seq
DB search
MNFQQEKIVRFQDWNAEKNKDVLYSPNDEMNPGKLKLTLNTVSHTFQRGFESGSERLKRI
KRSLKSCSFDSAMSKNFGSEKKILDPLGPFLQRWNKIFVLTCVIAISLDPLFFYIPVVDD
ARKCLDLDRKLEITASVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDACAIAK
RYLMSYFLIDILAVLPLPQVVILIVIPKLKGSTSLNTKNLLKFIVFFQYFPRIIRVYPLY
TEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLVSIERETTCWQEACERFPTCNR
DSLYCDSFQMNNIFLNASCPIQDDNSDLFNFGIFLDALKSGVVESSTDFPQKFFYCFWWG
LRNLSSLGQNLQTSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRR
DAEQWMSHRLLPDTLRERIRRYEQYKWQETRGVDEENLICNLPKDLRRDIKRHLCLALLM
RVPMFEKMDEQLLDAMCDRLKPVLYTEDSYIVREGDPVDEMLFIMRGRLLTVTTNGGRTG
FFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQALTEVEAFALKADDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAGAS
SPSLGATIYASRFAANALRAIRRNSTRKTRMPERMPPMLLQKPAEPDFTSEEK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccagcaggagaaaatagtgaggttccaggactggaatgcagagaagaataaa
gatgtgctgtattctccaaatgatgaaatgaatccagggaaacttaaactgacattaaac
acggtttcacacacgtttcaaagaggctttgaatctggatctgagaggcttaaaaggatt
aaaagatcactcaagtcttgttcatttgatagtgctatgtctaaaaactttggttctgag
aagaagattcttgatccacttgggccattccttcagagatggaataagatatttgtgctg
acctgtgtcattgccatttctctggatccattgtttttctatattccagtggttgatgat
gccagaaaatgtttagacttggacaggaagttggagatcactgctagtgtgttgcggtct
ttcacagacatattttatataattcatattatctttcaattccgtactggatttattgct
ccgtcttctcgagtatttggaaggggtgttttagttgaagatgcttgtgctattgctaaa
agatatctaatgtcatacttcttaatcgacattcttgctgtccttccactcccgcaggtg
gtgatcttgattgtcattccaaaattgaagggctcgacatcattgaatacaaagaacttg
ttgaaatttattgtcttttttcaatatttcccaaggatcattcgagtatatccattgtat
acagaagttacaagaacttctggcatactaactgaaactgcatgggcaggagctgcgttt
aatctcttgctttacatgcttgccagtcatgtacttggagccttctggtacttggtttct
atagaacgggaaactacatgctggcaagaggcctgtgagaggtttccgacatgcaaccgg
gactctttatattgtgatagcttccaaatgaataacatatttttaaatgcttcctgtcca
atacaagatgataatagtgacttatttaattttggaatattccttgatgctcttaaatct
ggtgttgtcgagtcatctacggattttccacaaaagttcttttactgcttttggtggggt
cttcgaaatttgagttcacttggtcagaaccttcagactagtacctatgtctgggaaatt
tgctttgcagtcttcatttcgatcgcgggattagtattattttcatttcttattggaaat
atgcagacatatttgcagtcaaccactacgagattggaggagatgagagtgaaaaggaga
gacgcggaacaatggatgtcccatcgcttgctccctgacactctgagagagcggatcaga
cgttatgaacaatacaaatggcaagaaaccagaggtgttgatgaagagaatctaatttgt
aatcttccaaaggatcttagaagggatataaagcgccatctctgcctggctttgctaatg
agagtgccgatgtttgagaaaatggacgaacaactattggatgcaatgtgtgatcgactc
aagccagtactatacacagaggacagctacattgttcgggagggagacccagttgatgaa
atgctcttcataatgcggggtaggctgctgactgtgaccacgaatggtggaagaactggt
ttttttaattctgaatatctcaaggctggcgacttctgtggagaagaacttcttacatgg
gctttagatccccattcttcatcgaatctccctatctcgactagaactgtgcaagcattg
acagaagttgaagcctttgcattaaaagccgatgatttgaagtttgtagcgtctcagttc
cggagacttcacagtaagcagctccgccacactttcaggttttactcgcagcagtggagg
acttgggcagcttgttttattcaagcagcatggcggcgatacagtaagaaaaagcttgaa
gagtctcttagggaagaggagaataggttgcaggatgcgttggccaaggccggggcgagc
tcacctagtttaggtgccaccatttatgcttcacgctttgctgcaaacgcactgcgtgcc
ataaggcgtaatagtacacgtaaaacaaggatgcccgaaagaatgccaccgatgctgctt
cagaagccagcggagccagattttacttctgaagaaaaatag
DBGET
integrated database retrieval system
