Cannabis sativa (hemp): 115716017
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Entry
115716017 CDS
T08987
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115716017
Membrane trafficking [BR:
csav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115716017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
115716017
NCBI-ProteinID:
XP_030500565
LinkDB
All DBs
Position
5:complement(76701531..76709419)
Genome browser
AA seq
1470 aa
AA seq
DB search
MASNPPPFEVEDQTDEDFFDKLVDDDFGPSESSAPKFPEGNDSDDAKAFANLSIADESPA
LEDFSGEGMVDELKTEDGAAQVDAADGSGIICEKSVVEVNAKDGNSGVSANSALDAVPEP
KNDGTGSELRLESMSNESGSGGFKVVGWSSFHADSAQNGGHGFGSYSDFFSELDAGVSGE
VPGKAGEDLTTQANMFPSHEEHRDESLNNMVNYTQHQESQNFVAPVEQQNTNVQDVNTSQ
YWENLYPGWKYDSNTGQWYQVDVVDPTAQAQGSFGTNSAVSDWTAVSEVKTEISYLQQTP
HSPMGTVAKTNTHMQLQSNSFMGVSAETNAYMQQQTSNSAVGTAAETNSYVQQTSNSVVG
PATETSTSHSVSDWNQPSQASNGYPEHMIFDPQYPGWYYDTIAQEWRTLDSYTSTVQPAV
QDQNGVVSSNIYSQNKSSSFEEYRQDDNHGSRGLGGQGQEGGWGGSYNNSNQNNLNLWQA
EVPKSAASTAFGGNQQLDSKYDGSQFYTNENPQASLSSFGAVQSYNRANQGHNETNGTLG
FQGFNPVTQPFNQVNLNDQNHISNDYYSSQKPVSQQSFPGGNQLPYNPSVGRSPDGRPPH
ALVTFGFGGKLIVLKDHSNVGNSSYGSQGPVGGIVSVLNMQEVVTENTNVSTSSSCNYLR
ALCQQSFPGPLVGGNVGSKELNKWIDERITNCESSDIDFKKGQILKLLLSLLKIACQHYG
KLRSPFGSEVALKDNDTPEAAVAKLFASAKASGAQFTEYGALNYCLQKLPSEAELQATAS
EVQNLLVSGRKREALQYAQEGQLWGPALVLASQLGDQFYVDTIKQMAFRQLAAGSPLRTL
CLLIAGQPAEVFSVNAVADGSVPGSVTMFQQPAQFGTSGMLDDWEENLAVITANRTKDDE
LVIIHLGDCLWKEKSEITGAHICYIVAEANFESYSDSARLCLIGADHWKFPRTYASPEAI
QRTELYEYSKVLGNSQFILLPFQPYKLVYAHMLAEVGKVSDSLKYCQAILKSLKTGRAPE
VETWKQLVLSLEDRIRTHQQGGFTSNLAPTKLVGKLLNFFDSTAHRVVGGLPPPAPSTSH
GSIHSNEHLHQQQMAPRVSGSQSTMAMSSLMPSASMEPISEWAADGNKMSMHNRSVSEPD
FGRTPRQDDSSKEGTSADSRGKGSVSGGTSRMSRFGFGSVLLQKTMGLVLRPRSGRQAKL
GEQNKFYYDEKLKRWVEEGVEAPAEEAALPPPPTMSTFQNGMSDYSMQSTLKSDATSLGG
SPDPKSSTPEYSSGIPPIPPTSNQFSARGRVGVRSRYVDTFNQGGGRPANLFHSPSVPSV
KPAVAANAKFFIPTPASGEQSMEAIAESVQEDVPTVGTHEEASTSTGNAAFQVPPPSASM
QRFPSMGNIPGQRVMTNSNGSLSSLSRRTASWSGSFNDSFSSPKETEVKPLGAVSSGMPP
TMFSPTDPSSMMRAQMNGGNFADELQEVEL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaatcctcctccattcgaggtggaggatcagacggatgaggatttcttcgat
aaattggtggacgatgattttggtccctcggaatcatctgccccaaaattccccgagggt
aatgattccgacgatgctaaggcgtttgctaatcttagcattgcggatgaatctcctgca
ttggaggattttagcggtgaaggtatggtggatgaactgaaaactgaagacggtgctgcc
caagtagatgctgcagatgggtctgggataatttgcgaaaagagtgttgttgaagttaat
gcgaaagatgggaattctggtgtatcggcgaactcagctttagatgcggttcccgagcct
aaaaatgatgggacaggatctgaattgaggttagaatccatgagcaatgagtccggcagt
ggagggtttaaggtggtggggtggagttcgttccatgctgattctgctcagaatggtggt
catgggtttggatcctactccgacttttttagtgaattggatgcaggtgtttctggggaa
gttcctggaaaagctggtgaagatttgaccactcaagcaaatatgttcccttcccatgaa
gagcatagggatgaaagcttgaacaatatggttaattacacacaacatcaggaaagtcaa
aattttgttgctccagtagagcagcaaaatacaaatgtgcaggatgtaaataccagtcaa
tactgggaaaatctttatccggggtggaagtacgactcaaatactgggcaatggtaccaa
gtggatgttgttgatcctacagctcaagctcaaggtagctttggaacgaattctgctgtc
agtgactggactgctgtttctgaagttaaaactgagatttcatatttgcagcaaacgcct
cactctcctatgggaactgttgctaaaaccaatactcatatgcagctacagtctaattct
tttatgggagtttctgctgaaacaaatgcctatatgcagcagcaaacatctaattctgct
gtgggaactgctgctgaaaccaattcttatgtgcagcaaacatccaactctgttgtggga
cctgctactgaaaccagtacaagtcacagtgtgtccgactggaatcaaccgtcccaagca
agcaatgggtatcctgaacatatgatttttgatccccagtatcctggttggtattacgac
acaatcgcccaagagtggcgaactctggattcttacacttcgactgttcaaccagcagtt
caggatcaaaatggggttgtttcaagtaatatatattctcagaacaaaagtagttccttt
gaagagtacaggcaggatgacaatcatgggtcaagaggccttggtggccaaggtcaagaa
ggtggatggggtggatcttataataatagtaatcaaaacaatctgaacttgtggcaagct
gaagtacctaagagtgcagcctcaacagcatttggtggaaatcagcaactggatagtaaa
tatgatggttcacaattttatacaaatgaaaatccgcaggcatctttgagttcttttgga
gcagttcaatcgtacaatagagctaatcaagggcacaatgagaccaacgggactctggga
ttccaaggctttaaccctgttacccagccgtttaatcaagtaaatctcaacgaccaaaat
catatctcaaatgattactatagcagtcagaagcctgtatctcaacaatcatttcctggt
ggcaatcagttaccttataatcctagtgttggaaggtcaccggatggacgtcctccacat
gctctagtaacttttgggtttggaggaaaactcatagtattgaaggatcatagtaacgtt
gggaactcatcttatggaagccagggtcctgttggaggcatagtttctgttctaaatatg
caagaagttgtgacagagaacaccaatgtttcaaccagcagtagctgtaattaccttcgt
gcgttgtgtcaacagtcctttcctggtccattggttggcggcaatgtaggaagcaaagag
ttgaataaatggatagacgagagaatcacgaattgtgagtcatctgacatagatttcaag
aaaggtcaaatattgaagttgctactctccttgcttaagatagcttgccaacattatgga
aaacttcgttctccctttggttctgaagttgcattgaaagataatgataccccagaagca
gcagttgctaaactttttgcttcagcaaaggcgagtggagcacaattcactgagtatggc
gctcttaactactgtttgcagaaactgccttctgaagcggaactacaggcaactgcttct
gaagtgcaaaatcttctagtttctggtagaaagagagaggctttacagtatgcacaagaa
ggtcaattgtggggtcctgcacttgttcttgcttcacaactcggtgatcagttctatgtt
gatactatcaaacaaatggctttccgacaattggctgcgggatctcctctgcggactcta
tgcctgcttattgcagggcaaccagctgaagtgttttctgtaaatgctgttgctgatggc
agtgttccgggttctgttacaatgtttcaacagcctgcacagtttggcaccagtggtatg
cttgatgactgggaggagaatctagcagtaattactgcaaacagaacaaaagatgatgag
ttggtaatcatccatcttggagactgcctgtggaaagaaaagagtgagattactggagca
catatctgctatatagttgcggaagcaaattttgagtcatactcagacagtgcaagactc
tgtctgattggagcagatcactggaaatttcctaggacctatgctagtccagaggctatt
cagaggactgagttatacgaatactcaaaggtgcttgggaattctcagtttattttgcta
ccatttcaaccatataaattagtctatgctcacatgcttgctgaagtgggaaaggtttca
gattctttgaaatactgtcaagcaatattgaagtctctgaaaactggtagagcacctgaa
gtagaaacttggaaacaattagtattatcacttgaagacaggattagaacccatcaacag
ggaggatttacttcaaatttggctcctacaaaattagttggaaagttgctgaactttttc
gatagtactgcacatcgtgttgttggaggtttgccgccacctgcaccgtctacatcacat
ggaagtatccacagtaatgaacatttgcaccagcagcagatggctcctagagtatcgggt
agtcaatcaacaatggctatgtcatctttaatgccttctgcttcaatggagcccatcagt
gagtgggctgctgatggcaataaaatgtcaatgcataatagaagtgtttcagagccagac
tttggtagaactccaagacaagatgactcatcaaaggaaggaacctcagctgattctcga
ggaaaaggatcagtctccggggggacatctcgcatgtcacgtttcggttttgggtcagtg
ttgctgcaaaaaacaatgggcctagttttaaggccccgctctggtcgtcaggctaaatta
ggtgaacagaacaagttctactatgatgaaaagctgaagagatgggttgaagaaggtgtt
gaggcccctgctgaggaagctgctctgccacctcctccaacaatgtccaccttccagaat
ggaatgtcagattacagtatgcaatctacgttgaagagtgatgcaacttctcttggaggt
agccctgatccaaaaagttcaactccagaatattcttcagggatcccacctattccaccc
acttcaaatcaattctcagcacgtgggcgggtgggtgttcggtcaaggtacgttgacact
tttaaccagggtggcggtaggccagcaaatttatttcattcgccctctgtaccatctgtt
aagccagctgttgctgccaatgcaaagtttttcattcctacccctgcctcgggagaacag
tcaatggaggctatagcagaaagtgtgcaggaagacgtgccaacagtggggacacatgaa
gaagcttccacatctaccgggaatgcagcattccaggttcccccaccgtcagcatccatg
caaaggttcccaagcatgggtaacattccaggccagcgagttatgacaaatagcaatggc
tccctttcttcactctcgcgaagaacggcttcatggagtggaagttttaacgattcattc
agctctccaaaagagacggaagtaaaacctttaggagcagtgtcgtcgggcatgcctcca
actatgttttcgcccactgacccatcatctatgatgcgtgcacagatgaatggtggcaat
tttgctgatgaactccaggaagtggagctttga
DBGET
integrated database retrieval system
