Cannabis sativa (hemp): 115716272
Help
Entry
115716272 CDS
T08987
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115716272
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115716272
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115716272
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115716272
Spliceosome [BR:
csav03041
]
Common components
Common spliceosomal components
SR proteins
115716272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
115716272
NCBI-ProteinID:
XP_030500893
UniProt:
A0A803PJS0
LinkDB
All DBs
Position
5:complement(48661514..48664547)
Genome browser
AA seq
191 aa
AA seq
DB search
MPYSRQRRSPSPESPGRGNRRSRSLSLTRSRRSRSRSPEDVVNPGNNLYVTGLSTRVTTD
DLEKFFGKEGKVLECHLVTDPRTRESRGFGFVTMETLEDAERCVKHLNRAVLEGRLITVE
KAKRKRGRTPTPGRYQGLRDKRGGHGNRHSRSYSPRRWPDRDPYSRDQRRRSRSPYDRRR
REQSPPAGYRR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgccatattcaagacaaagaaggtctccttcaccagagtcacctggtagaggaaaccga
cggtcaagatcattgtccttgacgaggtcaaggagaagccgttcaaggagtcctgaggat
gtagtcaaccctgggaataacttgtatgtgacaggcttatcgacaagagttaccactgat
gatcttgagaagttttttggaaaagaaggaaaggttttggagtgccatctggttacagat
cctcgcactagggaatctcgtggatttgggtttgtcactatggaaactcttgaagatgct
gagcgctgtgttaaacatttaaatcgtgcagttcttgaaggtcgattaatcactgtagaa
aaggcgaaacggaagcgaggaaggacaccaactccgggcaggtatcaaggtttgcgagat
aagcgaggtggccatggtaatagacattctcgtagctactcaccacgtcgatggccagac
agagatccctattctagggatcaaaggagaagatcaagatctccatatgatagaaggcgc
agggaacagtccccaccagctggttatcgtagataa
DBGET
integrated database retrieval system
