Cannabis sativa (hemp): 115716539
Help
Entry
115716539 CDS
T08987
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115716539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csav02000
]
115716539
04147 Exosome [BR:
csav04147
]
115716539
04090 CD molecules [BR:
csav04090
]
115716539
Enzymes [BR:
csav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115716539
Transporters [BR:
csav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115716539
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115716539
CD molecules [BR:
csav04090
]
Proteins
115716539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_16
AAA_21
AAA_25
MMR_HSR1
Zeta_toxin
AAA
AAA_15
nSTAND1
SbcC_Walker_B
Rad17
Motif
Other DBs
NCBI-GeneID:
115716539
NCBI-ProteinID:
XP_060972010
LinkDB
All DBs
Position
5:complement(1556204..1565423)
Genome browser
AA seq
1260 aa
AA seq
DB search
MSSTSSVDEKKKEVVIISSSERSLRFDKLLRYGDGLDWSLMVLGSLGSIVHGMAQPIGYL
LLGKALNAFGDNIDDIPAMVNALYKVVPYVWYMAIATFPAGILEIGCWMYASERQVGRIR
LAYLKSVLNQEIGAFDTDLTTAKIINGISNHINIIQDAIGEKLGHFLSCVATFLCGILIA
GICCWEVAILSLLVVPMILAIGATYTNKMNTISIAKIIFQSQATSLVEQTISQIKTVYAF
VGENSAIKSFSERLEQQVMVSKGEALIKGVGTGLFQTVSFCSWALIIWIGAVLVTQNKAK
GGDIIAAVMSILFGAISITYAAPDMQIFNQAKVAGYEVFQVIQRKPTISSDSSQGKTLGK
VCGNIEICDVFFSYPSRPEKQILEGFSLSIPAGKTVALVGSSGCGKSTIISLVARFYDPS
KGKILIDDHNIKDLDLKFLRSNIGIVSQEPSLFTGTIKDNIKVGDMDANDQQIQIAAEMA
NAHSYISQLPNQYSTQVGQRGVQLSGGQKQRVAIARAILKNPPILLLDEATSALDTESEK
LVQDAVEKAMQGRTVILIAHRLSTIVNADMIAVVENGHVTEIGTHRGLLDRSEFYNNLFN
MQNLNPILESNRIEVSNLVLLLIDRSENSCEEDESCQNHMSFQNDIEENKTVTESVHPVL
ENSKQEESERGRKRTIFLRIWFGLRKRELTKIGLGSVAAAFSGISKPVFGYYIITIGVAY
YHNDARRKVGLYSLLFFVIGLLSLFSHTLQHYFFGIVGEKAMANLRRALFSGVLNNEVAW
FEKPENSVGSLTSRVISDTTMVKTIIADRMSVIVQCISSILIATIVSMYVNWRMGLVAWA
VMPCHFIGGLIQAKSAKGFSGDLASSYSELVALAVESSTNIRTVASFCYEENILSKAKMS
LENPIKKSRKQSIKYGLIQGFSLCLWNIAHAVALWYTTVLIDRRQAKFEDGIRSYQIFSL
TVPSITELWTLIPTVISAISVLTPAYQTLDRKTEINPNTPEPSNRDLIKGQIEFQHVKFN
YPLRPEVTVLNNFSLEIEAGSKVALVGPSGAGKSSILALLLRFYDSIEGNILIDGKEIKE
YNLRWLRTQIGLVQQEPLLFSSSIRSNICYGTNEATETEIVEASRQANIHEFVSTLPNGY
DTVVGEKGCQLSGGQKQRVAIARTLLKRPSIMLLDEATSALDAESEKSIVNALESMNLNG
DRMSCITQITVAHRLSTIKNSDTIVVMDKGEIVEMGSHSSLLESKGLYSRLSRLQSFSGH
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactagtagtgttgatgagaagaagaaagaagttgttatcatttcaagtagt
gaaagaagtttgagatttgataagcttttaagatatggagatggtttggattggagtctt
atggttttgggtagtttagggtcaattgttcatggcatggctcaacctattggatactta
cttcttggcaaagctcttaatgcctttggtgataacattgatgatattcctgccatggtt
aatgccctctacaaggttgttccctatgtatggtacatggccattgccacatttccagct
ggaattcttgagattggatgttggatgtatgcaagtgaaagacaagtaggacgaataaga
ttagcttatctaaaatcagtccttaatcaagagattggagcttttgacacagatttaaca
actgcaaaaatcattaatggaataagtaaccacatcaatatcattcaagatgcaattgga
gagaagttgggtcattttctatcatgtgttgcaactttcttgtgtggaattttgattgct
ggcatatgctgttgggaagtggcaatcctatctcttttggttgttccaatgattcttgcc
attggagctacttatacaaacaaaatgaacactatttccattgccaaaatcatattccaa
tctcaagcaacttcattggtagaacagacaatttctcaaataaaaacagtgtatgcattt
gttggagaaaactctgcaataaaatcattctcagagaggttagaacaacaagttatggta
agcaaaggagaagctttaataaagggagttggaacaggactgtttcaaacagtttccttt
tgttcttgggctcttattatatggattggagctgttttagtcacacaaaacaaagctaaa
ggtggagatatcatagctgctgtcatgagcattctctttggagctatatcaattacttat
gctgcaccagatatgcaaatattcaatcaagccaaggttgcagggtatgaagttttccaa
gtgattcaaagaaagccaactataagtagtgattcttcacaaggaaaaacacttggaaag
gtttgtggcaacattgaaatatgtgatgtgtttttctcctatccatcccggccggagaag
caaatccttgaagggttttcgctatcaattccagccggaaagacagttgctctagtgggg
agtagtggttgtggaaagagtactatcatttctttagttgcaaggttctatgacccttca
aaaggaaaaattctcattgatgaccataacattaaggatttggatttaaagttcctaagg
agtaacataggaatagtttcccaagaaccatcactatttacaggcaccattaaagacaac
ataaaagttggtgatatggatgcaaatgaccaacaaattcaaattgcagcagagatggct
aatgcacattcttatatttcacaactaccaaatcaatactcaacacaggtaggacaaagg
ggagttcaactatcagggggtcaaaagcaaagagtagccattgcaagagccattcttaaa
aaccctccaatccttttgctcgacgaggccacaagcgcgcttgacacagagtcagagaag
ttagttcaagatgctgttgagaaagctatgcaaggaaggacagttatcttgattgcacat
aggttgtcaaccattgttaatgctgatatgattgcagttgttgaaaatggacatgttacc
gagattggaactcatcgcggccttcttgataggagtgaattctacaacaacttgttcaac
atgcagaaccttaatccgattctcgaatcaaatagaattgaagtatctaatcttgttcta
ttgttaattgacagaagtgaaaattcttgtgaagaggatgaaagttgtcaaaaccatatg
tcatttcaaaatgacatcgaagaaaataagacagtaacagaatctgtacatcctgtcttg
gaaaattccaagcaagaagagagtgaaagaggaaggaaaagaacaatattcttaagaatt
tggtttggattgagaaaaagagagctcacaaagattggtctcggttctgttgcagctgct
ttttctggcatttcaaagcctgttttcggatactacattatcactataggagtagcatac
taccataatgatgcaaggagaaaagttggcttgtattcattgttattttttgttataggg
ttgctttctttattctctcatactttgcaacattacttctttggaatagttggagagaaa
gccatggcgaatttaagacgagctttgttttcgggagtactcaacaatgaagtggcatgg
tttgagaagcctgagaacagtgttggttcactcacatctcgggttattagtgacacaacc
atggtgaaaactatcattgcagatcgaatgtctgttattgtacaatgcatctcttcaata
ttgatagcaacaattgtaagtatgtatgttaattggagaatggggttggtagcttgggca
gttatgccttgtcacttcattggtggactaattcaagccaagtctgctaaaggattttcg
ggtgacttagcttcttcgtattctgaacttgttgctcttgctgttgagtcttcaaccaac
ataagaactgttgcctctttttgttatgaagagaatatactaagcaaagccaaaatgtca
ttggaaaatcccataaagaagagcagaaaacaaagtattaagtatggtttaattcaagga
ttttcactttgcttatggaacattgcacatgctgttgctctttggtacacaacagttttg
attgatagaagacaagcgaaattcgaagatggtataagatcttatcagatattctcactc
acagttccttcaatcacagaattatggacacttattcctactgttatctctgctataagt
gtactaactcctgcatatcagacacttgaccgaaaaacagaaatcaatccaaacacacca
gagccttcaaatcgcgatttgatcaaagggcaaatcgagtttcaacatgttaagttcaac
tatccattgaggcctgaagttactgtccttaacaactttagtttggaaattgaagcaggc
tccaaagttgctcttgttggtccaagtggggctggaaagtcttccattttggcacttttg
cttagattttatgattctatagaagggaatatactcattgatgggaaagaaataaaggaa
tataacctgagatggttgaggacacaaattggattggtgcaacaagagcctttactgttt
agttcttcgattcgatccaatatttgttatgggacaaatgaggctacagaaactgagatt
gtggaagcatcaaggcaagcaaacatacatgaatttgtaagcactttacccaatggatat
gacactgttgttggggaaaaagggtgtcaactttcgggtggccaaaagcaaagagtcgcc
attgctagaactctgctgaagcgaccttcaatcatgctgctcgacgaagcaacaagtgct
cttgatgctgagtctgagaaaagcattgtcaatgctttggaatcgatgaatctaaatggc
gatcgaatgtcatgtattacacaaatcacagttgctcataggctttccaccatcaaaaac
tcagatactattgttgttatggacaaaggtgagattgttgaaatgggttcacattcaagc
ttattagaatccaagggattgtactcaagactctcccggttacagagtttttcaggacat
taa
DBGET
integrated database retrieval system
