Cannabis sativa (hemp): 115716684
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Entry
115716684 CDS
T08987
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115716684
Transcription machinery [BR:
csav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
115716684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
MinC_N_1
Motif
Other DBs
NCBI-GeneID:
115716684
NCBI-ProteinID:
XP_030501396
UniProt:
A0A803PPP6
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Position
5:complement(5653003..5656346)
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AA seq
537 aa
AA seq
DB search
MGVVTVSSSASRTPLGLSTKFSSHGFAPKKPLIVAFKADKPNKTTLVSSHEPIILPIEPH
KEIQNRVRKAKKTKNRVKATATDEVSTSTMEVDYNEAAAKLENIYKLSPATTDTDVDADG
ADRLMSRGRRRKRKVSESDGKTGKNTSDTVVRNRTRKERMSLDSRIALKRAKEENEVVSI
KKRKNSWKGKNNAEKVVVSVRNRKVAETEEEKIQKLVREYSTSTDLVSLDWKKMKIPPVL
PSTEHTWLFKLMQPLKELLKVQENLQTAMGREPTEGEIAEATNMSVVEVKKQLEIGWAAR
NKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLF
WIRHAIIRSMTVSSFTRVSFGLESVRVEIQKAKLQLMFELNRLPTEKEIVERVGISPERY
NEVMKASKPVYSLHSKHAVTQEEFINSITDVEGVEGDDRRKPALLRLALDDVLDSLKPKE
SLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYMV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtttctagctcagcttctcgaacccccctaggattaagcacaaaa
ttctcaagtcatggattcgcacccaagaagcccttgattgtggcatttaaagctgataag
cctaataaaactacgttggtttcttctcacgaaccaataattttgcccattgaaccacac
aaggagattcagaacagagtaaggaaagctaaaaaaactaaaaatcgagtgaaagctaca
gctaccgatgaagtttctactagtaccatggaagtggattacaatgaggctgcggccaag
ctggaaaacatttacaagcttagccctgcaacaaccgatacagatgtggatgcagatggt
gctgatcgcttgatgagtagaggccgaagaaggaagagaaaggttagtgaaagtgatgga
aaaacaggtaagaacaccagtgatactgtggttagaaaccgtacaaggaaggagagaatg
agtcttgatagtaggattgcattgaaaagggcaaaggaagagaatgaggttgtttcaatt
aaaaagaggaaaaacagttggaaaggaaagaataatgctgagaaagttgttgtttcagta
agaaatagaaaagttgctgagactgaagaagagaagattcagaagcttgttagggagtat
tcgacttcaactgatttggtcagcttggattggaagaaaatgaagataccgccagttctt
ccttctacggagcatacttggttgttcaagttaatgcagcctctaaaggaactcctcaaa
gtgcaagagaatttgcaaactgctatggggagagagccaactgaaggagaaatagctgaa
gcaacaaatatgagtgtggttgaggttaaaaaacaattggaaattggctgggctgcacga
aacaaactcattaagcacaatcttcgacttgtattgtttgtaatgaacaaatattttcaa
gactttgcaaatggtccaaaatttcaggacctttgtcaggctggagttaagggactaata
acagcaattgatcgcttcgaaccaaaaagaaaattccggctttccacttatggtcttttc
tggattaggcatgccatcatacgttccatgacagtctcaagctttacccgtgtttcattt
ggcctcgaatctgtaagggtagaaattcagaaggccaagcttcagttgatgtttgagctc
aacagattaccaacagaaaaagaaatagttgagagggttggcatttcacccgagaggtac
aacgaagtaatgaaagcctcgaaacctgtttactctcttcattcaaagcatgcagttaca
caagaagagttcatcaacagtattactgatgtcgaaggtgtggaaggtgatgaccgacga
aaaccagctcttctcaggcttgctcttgatgatgtgcttgattctctaaagcctaaggag
agtttggtggtgcgacagagatatggactagacggtaaaggcgatagaacactaggagaa
attgctggaaacttgaacatttcaagagaaatggttaggaagcatgaagtgaaggctctc
atgaagctcaagcatccagctagagttgattatctgcgtcgatacatggtctaa
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