Cannabis sativa (hemp): 115716818
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Entry
115716818 CDS
T08987
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115716818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115716818
03029 Mitochondrial biogenesis [BR:
csav03029
]
115716818
Membrane trafficking [BR:
csav04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115716818
Atg1 complex
115716818
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115716818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115716818
NCBI-ProteinID:
XP_030501583
LinkDB
All DBs
Position
5:1519023..1522420
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AA seq
625 aa
AA seq
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MDLHSNPQSELGKLEHIVSQFLLKSLHIILDSRIPSLCRNDHSGDLSLVSRVKKSDKWFN
LILGDRPPALENLNFWHRNVMDPMIIDIILVHEGLNSSSVDNLYTGSTVGTPVETVIERW
VVQYESPRVVAPQSGEISVSYKKTYQKSIVLLRALCSLMRLLPAHKIFKQLTSSSHTYNF
DIIYKVSSFGDPFTRPEEKFMEEYSFTPVEAFPGRLCMSVTYHSSLSDFNLEPSTAMPPK
IIKDYVGSPATDPMRSFPASDKGVRATSFPLRGVQSSSPVPAERPHSWTSGFHRPGPFVQ
NQTLFGSPPAYRPSPTSSDFPSSPNDMYPNRVHNRLLSYQKPISFDEYQLSPPFSSSPSP
SPSPPTYFYNGNNPNSMQGRRHSETAPVSIPSTMTTRGSRYLSSNFSDPSRNSLPPLSPR
STRNDNSSQESPSGIRSLRRLDPSRAGETPTGNSNHFSGPKAIKDSRDDSGRFSGPLSSS
GSPRVGFSPGSGRLSFQDDMDDIGFSCPFDVDDLPDFHHSQNLPGRKPSDPASQSLPMVR
KSQSHDAAVGVLVHMLRNAPPLRQDSSCYSTNSFKAEPDGGITTASGFFVPRKAADALEE
LRSYREMKDLLLSKSGTRVVSKEEA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcatagtaatcctcaatctgaattggggaaattggaacatattgtttctcaa
tttcttttgaagagtttgcatattattttggactctaggattccctctttgtgtcgaaat
gatcatagtggcgatctttcgttggtatctcgggtgaaaaagagtgacaaatggttcaat
ttaatactaggagatcgccctccagcattagaaaatttgaacttttggcatagaaatgtg
atggatccaatgataatcgacataatacttgttcatgaagggctcaactcttcatctgtg
gacaatctgtacaccggttcaacagttggaacgcctgttgagacggttatagagaggtgg
gttgttcagtatgaatctcctagggtggtagctcctcaaagtggtgaaatttctgtctct
tacaaaaagacttatcagaaatcgatagtacttcttcgtgctctatgttcgttgatgaga
cttttgccagcccacaagatctttaaacagctaactagttctagtcatacttataatttt
gatattatttacaaagtttcttcttttggggatccattcactagaccagaggagaaattc
atggaagaatatagtttcacgcctgtggaggctttccctggtcgtctttgtatgtctgta
acttaccattcaagcctatcagattttaatcttgagccttcaacagcaatgccacctaag
ataattaaagattatgttggcagtcctgctactgaccctatgagatctttccctgcttcg
gataagggtgttcgtgcaacttcctttccattgagaggagttcaatcttcatctcccgta
ccagctgaacgcccacacagttggacaagcggttttcacaggcctggaccctttgttcaa
aaccaaacacttttcggatctccacctgcatatcgtccatctcctacatcatccgatttt
ccatcatcacctaacgatatgtatcccaacagagttcataaccgattgctaagctatcaa
aagccaattagttttgatgagtatcagctttcacctccattttcgtcgtccccatctcca
tctccatcgcctcctacatacttctacaatggtaataatcctaattcaatgcaaggtcgt
agacattcagaaaccgcccctgtatctattccatcaacaatgacaaccagaggttctaga
tacctttcttcaaatttttccgatccaagtagaaattctcttcctccattatcccccaga
agcactagaaacgataattcatcgcaagagtctccatctgggataaggtcattacggaga
ttagatccttcaagagctggagaaaccccgactggaaattcaaaccatttcagtggcccg
aaggccataaaagatagtagagatgattcagggcggttttcaggaccattatcttccagc
ggctcaccacgtgttgggttctctcctggctccggcagattgtcttttcaggatgacatg
gatgatattggcttctcatgtcctttcgatgtcgatgatttaccagattttcatcacagt
caaaatcttcctggcagaaaaccttccgaccccgcttcacaatcactgccaatggttcga
aaatcacagtcacacgatgcagctgtcggtgttctcgttcacatgcttaggaatgcacct
cccctgcgtcaagattcgagctgttactcaacgaactcctttaaggccgaacctgatgga
ggaatcactactgcttcaggcttctttgtgccccgaaaggcagctgatgcactcgaagag
cttcgaagttatagagaaatgaaagacctcctcctctctaaaagtggaactagggtggtt
tctaaagaagaagcataa
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