Cannabis sativa (hemp): 115716841
Help
Entry
115716841 CDS
T08987
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115716841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115716841
Spliceosome [BR:
csav03041
]
Common components
Common spliceosomal components
SR proteins
115716841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115716841
NCBI-ProteinID:
XP_030501604
LinkDB
All DBs
Position
5:complement(784198..788726)
Genome browser
AA seq
289 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEIEDLFYKYGRIVDVELKIPPRPPCYCFVEFESSRDAED
AIRGRDGYNFDGCRLRVELAHGGSGRGPSSSDRRGGYGGGGGSSGGGGGTGRFGVSRHSE
FRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGDGTFGLVDYTNYDDMKYAIRKLDD
TEFRNPWARAYIRVRKFEASPSRSVSRSRSRSRSPKRNRSKSVDRSSVSRSRSRSRSRSM
SRSRSRSPSPVKSSRPRSRSRTKSRSRSMSRSRSRSRSGSPRPARSGSG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgcttttctcgcactatttatgtcggcaacctgccctcagatataagagag
tgggaaattgaagatctgttctataagtatggtcgtatagtagatgttgaactgaagata
ccacctcgtcctccatgctattgttttgttgagtttgagagttctcgagatgcagaagat
gcaatcaggggtcgagatgggtataactttgatggttgccgcttaagggttgagcttgcc
catggtggcagtggtagagggccatcttctagtgatcgtcgaggtggctatggtggcggt
ggtggtagtagtggcggtggcggtgggactgggcgctttggtgtctctcggcattctgag
tttcgagttattgtgcggggacttccttcttctgcgtcatggcaagatttgaaggatcat
atgcgcaaagctggtgatgtatgttttgctgaggtttctcgtgatggtgatgggactttc
ggtctagtggattatactaattatgatgacatgaaatatgctattcggaaacttgatgat
actgaatttagaaatccatgggcaagagcttatatcagggtcaggaaatttgaagccagt
ccttccaggagcgtaagtagaagccgcagcaggagcagaagtccaaaaaggaaccgcagt
aaatctgtggaccggtcatcagtatcaaggtctagatcgaggtcgagatcgagatcgatg
tctaggtctagatctagatcgccttctcccgtcaaatcttcgaggccaagatcaagatca
agaacaaaatcaagatcgagatcaatgtcaaggtcaagatcaagatcgaggtcaggatct
cctcgtccagcgcggtctggcagcggttga
DBGET
integrated database retrieval system
