Cannabis sativa (hemp): 115718163
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Entry
115718163 CDS
T08987
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115718163
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115718163
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
U-box type E3
115718163
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
SHOCT
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115718163
NCBI-ProteinID:
XP_030502982
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All DBs
Position
5:complement(68830217..68837365)
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AA seq
935 aa
AA seq
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MAVYYKFKSAKDYDSIAMDGPFISVGTLKEKIFENKHLGRGTDFDLVVTNAQTNEEYIDE
GMLIPKNTSVLIRRVPGRPRMPIVTDPNPMVEDKMEELEPEKTSFSVADSSAMKYHDDSE
WDDLGGDLYEIPEVVPVQSSHVLPEATPTNKADEESKLQALIDTPALDWQRQGPEGFGGA
GRGFGRGMGGRMMGGRGFGMERKTPPQGYICHRCKVPGHFIQHCPTNGDPNFDIKRVKPP
TGIPKSMLMATPDGSYALPSGAVAVLRPNEAAFEKEIEGFPSTRSVGDLPPELHCPLCKE
VMKDAVLTSKCCFKSFCDKCVRDYIISKSMCVCGATNILADDLLPNKTLRDTINRILESG
NSSADNAGSTFQVQDMESARCPLPKNPSPSMSAASKGEHRPSPVKEETLKVEYIADEAKP
IIATQQTVEKVKTARIADVSEPTHESVSVKEPASQCSAPLVEEEVQQKLISVEAGKKKKK
KKVRMPANDLQWKASQDFPVDNYMMPMGPSAYNPSYNLSYNPSAYNPYWGGMQPSMDGYM
TPFGGQMPGQMPGQMHGQMHGQIPGQMPGQMPYMGYNIGPLDMPFGPGFVQQDPFGGQGC
MYPVAPPQRDLSDFGMGRNLAPPHPLMSREEFEARKADLRRKRENERRGDSSRDFSKDLD
FGREVNSRGGAGPMKPKSVQRPVDRSPPPPPPPDYTHRHRSERSSIDRPPRDIEPPRPPK
RKSDQHHDRERDRDRDHDRDRDYDYHDRESDHHHHYQQRRRSGSSGRPTSEASTKPSASA
SASAAASASSAAALEAAAAALDRKNKASVFSRISFPEGEVSKKRKLSSSPAKDTGGSGGG
ASVSSTHHKTASSNGYYEDHHHKSSSSSVKAAAAAVSGGGRKSAGSMDYESSDEDRHFKR
KPSRYEPSPPPASVDLEEPKHSSRGSRDRERSKHR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctattataaatttaagagtgcaaaagattatgattcaattgctatggacggt
cccttcatctcagttggtactttgaaagaaaaaatatttgaaaacaagcatttgggaagg
ggtactgatttcgatcttgtggtcaccaacgcccagaccaatgaagagtatattgatgaa
gggatgttgataccaaaaaatacttcagttttaattcgtcgagttccaggccggcctcgt
atgcccattgttactgatccaaatccaatggtggaagataagatggaagaacttgaacct
gaaaagactagcttctcagtagctgattcatctgccatgaaatatcatgatgattcggaa
tgggatgatctggggggcgatttatatgagataccagaagttgtgccagttcaatccagt
catgtacttccagaagctacccctaccaacaaagctgacgaggagagcaagctacaggct
ttgattgataccccagccttggattggcaaagacaaggtcctgaaggatttggtggtgct
ggtagaggttttggcaggggtatggggggaagaatgatgggtggacgtggttttggaatg
gagaggaaaacacctccacagggctatatatgtcacaggtgcaaggtgccagggcatttt
attcaacactgccctactaacggtgatccaaactttgacatcaaaagggtgaagccgccc
actggcattcctaagtccatgctgatggcaaccccagatggctcatatgcattaccaagt
ggtgcagtagctgtgttgagaccaaacgaagctgcttttgagaaagagattgaagggttt
ccatctacacgatctgttggagatctaccccccgaactacattgtccattgtgcaaggaa
gtaatgaaagatgcagttttgacaagcaagtgctgctttaagagcttctgtgataaatgt
gtcagggactatattatctcaaagtcaatgtgtgtctgtggggcaacaaatatacttgca
gatgatctattgcccaataagacgctcagggatacaatcaaccgtatattggaatctggt
aatagtagtgctgataatgctgggagtacatttcaagtacaagacatggagtctgcacgc
tgcccactgccaaaaaatccatctccttccatgtcagctgcatctaagggagaacataga
ccatcacctgtcaaggaagaaaccttaaaggtagagtacatagcagatgaggccaagcct
ataatagctacacagcaaacagtagagaaggtgaagactgcgagaatagctgatgtatct
gaacccactcatgaatcagtgagtgttaaggaaccagcatcgcagtgcagtgctccactt
gtggaggaggaagtgcaacagaagctaatttctgttgaggcaggaaagaaaaagaaaaag
aagaaagtccgtatgcctgctaatgatttgcagtggaaagcttctcaagatttcccagtt
gataattatatgatgcctatggggccttctgcttataatccttcttataatctctcttat
aatccttctgcttataatccatactggggtgggatgcaacctagtatggatggatatatg
accccatttggtggacaaatgcctggacaaatgcctggacagatgcatggacagatgcat
ggacagatacctggacagatgcctgggcagatgccttatatgggttataacataggaccc
ttagacatgccatttggtccaggttttgttcaacaagatccatttggtggtcagggttgt
atgtaccctgttgctcctcctcagagggatctgtcagattttggaatgggtaggaatcta
gcaccaccccaccctctcatgagtagagaagaatttgaagcacggaaagctgacttgagg
aggaaacgtgagaatgagagacggggcgatagcagcagggatttttccaaagatctggat
tttggtcgagaagtgaacagccgtggcggtgccggtccaatgaaacccaaatctgtgcag
agaccagtggatagatcaccaccaccaccaccaccaccagactatacccaccgccaccgt
tccgagagatcttccattgacagacctcccagagatatcgaacctccacgcccacccaag
agaaagtccgaccaacaccacgaccgtgaacgagaccgggaccgcgaccatgaccgtgac
cgagactatgactatcacgatcgagaaagtgaccaccaccaccactatcaacaacgccgg
cgatcgggttcctctggcaggccgacctctgaagcctcaaccaaaccctcagcttcggct
tcggcgtcggcggcggcttctgcctcttcagctgctgctttagaggcggcggcggcggct
ttagatcgcaagaataaggcgagcgttttctctcgcattagctttccggagggagaagtt
tcgaaaaagcgtaagctttcttcttctccggcgaaagatacgggaggtagtggtggtggt
gcgtctgtttcttcgacacatcacaaaacggcgtcgtcgaacgggtactacgaggatcac
caccacaagtcttcgtcttcgtcggtgaaggcagcggcggcggcggttagtggtggagga
aggaaatcagctggttctatggattacgagtctagtgatgaggataggcatttcaaaagg
aagccttctcggtacgagccttcgccgcctccggcgtcggtggatttggaggagcctaaa
cactcgtcaagaggttccagggatagggagcgaagcaagcacagatag
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