Cannabis sativa (hemp): 115718435
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Entry
115718435 CDS
T08987
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00240
Pyrimidine metabolism
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
115718435
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
115718435
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Motif
Other DBs
NCBI-GeneID:
115718435
NCBI-ProteinID:
XP_030503073
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Position
2:complement(15443019..15447797)
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AA seq
333 aa
AA seq
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MASSSSLSRLSNLRRHLDPSKTSDNNKGVGLIKVSPEVSEALSNGGPVVALESTIISHGM
PYPKNLETAKEVEAIVRGKGAVPATIAILDGIPCVGLSVVELERLANLGTQAQKTARRDI
AHVVASKGNGATTVSATMLIASMVGISVFVTGGIGGVHRHGENTMDISSDLTELGRTPVA
VISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTRTSGCKVPCRVDTAEECARLI
DANTKLGLGTGILIAVPIPQEHEASGSLIDSVVQRALKEARDKNITGNAETPFLLARVNE
LTGGASLSSNIALVKNNALVGAEIAVALSHLSD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttcatctctctcaaggttatcgaatctccgcagacacttggacccttcc
aaaacttcagataacaacaagggtgtaggattaatcaaggtttctccggaggtttctgaa
gccttgtcaaatggaggtcctgttgttgcccttgaatccaccattatttcccatgggatg
ccatatccaaaaaatctggaaactgcaaaggaggttgaggcaattgtgcgaggcaaagga
gctgttccggccaccattgcaattttagatggcataccatgtgtaggtttgagtgtggta
gagctagagaggcttgctaaccttggtacccaagctcaaaagacagctcgtagagacatt
gcacatgttgtggcctccaaaggaaatggcgcaactacagtatcagcaaccatgcttatt
gcttctatggttggcatttcagtttttgtaacaggagggattggaggagtccacagacac
ggtgaaaacacaatggatatatcttctgatctgactgagcttgggaggacaccagtagca
gttatttctgctggtgtgaaatcaatattagatataccccggacactggaatatttggag
actcaaggagtttgcgttgctgcttacaagaccaacgagtttccagcattttttacccga
acgagcggctgcaaggttccttgccgtgtagacaccgcagaagaatgtgcccgacttatt
gatgcaaacacgaaacttggtcttggaactgggattctaatcgcagttccaattccacaa
gaacatgaagcttctggaagtttaattgattctgtagttcaaagagctctgaaagaagct
agggacaagaacataacaggaaatgccgaaactcctttcttacttgctcgagtgaatgaa
ctaacaggaggtgcttctctttcatcaaatattgcgttggtgaagaataatgcacttgtt
ggagctgaaattgctgtagcactttctcaccttagtgattag
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