KEGG   Cannabis sativa (hemp): 115718512
Entry
115718512         CDS       T08987                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115718512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csav03019]
    115718512
   03036 Chromosome and associated proteins [BR:csav03036]
    115718512
Messenger RNA biogenesis [BR:csav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115718512
Chromosome and associated proteins [BR:csav03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115718512
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 115718512
NCBI-ProteinID: XP_060966150
LinkDB
Position
2:15461513..15467865
AA seq 351 aa
MSTFGAASAGNTNPNPNNSFEVAQPPSDSISSLCFSPKANHLVATSWDNQVRCWEIMRSG
NALASTPKASISHDQPVLCAAWKDDGTTVFSGGCDKQVKMWPLLAGGQAVTVAMHDAPVK
EVAWIPEMNLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRHPLMVVGTADRNLI
VFNLQNPQAEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFK
CHRDGSDIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMARCQQPIPCSAFNN
DGSLYAYAVCYDWSKGAENHNPATAKTSIYVHMPQDPEVKGKPRVGASGRK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgaccttcggggccgcttcggctgggaataccaatcccaatcctaataattccttc
gaggttgctcaacctcctagtgattctatttcaagcctttgtttcagtcccaaggctaat
cacttggtcgccacttcatgggacaatcaggtgagatgttgggagataatgcggagcgga
aatgctcttgccagtacacccaaggcttcaatatctcatgaccagccggttttgtgcgcg
gcttggaaggatgacgggacaactgtcttttctggtggctgtgacaagcaagtgaagatg
tggcctttattggctggtggtcaagctgttactgtggctatgcatgatgcacccgttaaa
gaggttgcttggattccagagatgaaccttttggtttcaggaagctgggataagaccctg
aagtattgggatactagacaaccaaatccagtccatacacagcaactcccagatcgctgt
tatgcactaacagtaaggcatccgctgatggttgttggcactgcagacaggaatctaata
gttttcaacttgcaaaacccacaggctgagttcaagagaatcacttcaccattgaaatat
cagacaagatgtgttgctgcctttcctgatcagcagggtttcttggttggctcaatagag
ggaagggtcggtgtgcatcacctagatgattcacagcaaagcaaaaacttcactttcaaa
tgccacagagatggcagtgatatatattcagtcaattctttgaacttccatccagtgcat
cacacatttgcaacagcaggctctgatggtgcctttaatttctgggataaagatagtaaa
cagagacttaaggcaatggcaagatgccaacaaccaataccttgcagtgcttttaacaat
gatggttcactttatgcgtacgcggtctgctatgactggagcaaaggggcagaaaatcac
aatccagcaacagcaaagacatccatatacgtgcacatgcctcaggatcccgaggttaag
ggcaagcctcgagttggagcaagtggaagaaagtga

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