Cannabis sativa (hemp): 115718686
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Entry
115718686 CDS
T08987
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115718686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115718686
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115718686
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
U-box type E3
115718686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
Arm_2
zf-RING_UBOX
HEAT_EZ
zf-C3HC4_2
zf-C3HC4_4
zf-Nse
zf-RING_2
KAP
HEAT_EF3_GNC1
zf-rbx1
MCAfunc
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115718686
NCBI-ProteinID:
XP_030503367
UniProt:
A0AB40EB96
LinkDB
All DBs
Position
2:64666651..64671508
Genome browser
AA seq
681 aa
AA seq
DB search
MEEEKSALVQSVIDVVSDIGSISEYKCTVKKQYCNLARRVKLLTPMFEEIRDSKEGLPED
TMKALVSFRDALRSANDLLRFGSEGSKIYLVLEREQVMSKFHDVTAKLEQALSGISYGKL
DISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLSSLYDSNDAPADPAILKRLVEKLQL
VGIDELAQESIALHEMVTASNGDPGASIEKMSMLLKKIKDFVQTENPNLDAPAREKSVPA
SCSGQPSTEKNHKVPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAHGTCPKT
QQALSNNTLTPNYVLRSLIAQWCEANGLEPPKRPSSSRPNKATSACSPAERTKIETLLRK
LTCGNPEDKRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVNLLSTPDSRTQEHAVTALLN
LSICDENKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDGNKITIGALGAIPP
LVTLLSEGNQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEALAI
LAILASHPEGKAAIGAAEAVPVLVEVIGSGSPRNRENAAAVLVHLCGGDQQHLVEAQELG
VMGPLVELAQNGTERGKRKAVQLLERMSRFVEQQKQAQELAEAEALAEAQALVEAQAQMQ
QLQLSSTETVDLRCSYPPQML
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagagcgcgcttgtgcagagcgtgatcgacgtcgttagcgatataggt
tcgatctccgaatacaagtgtacggtaaagaaacagtattgtaatttagctaggagggtg
aagctattgaccccaatgttcgaggagattcgtgatagtaaagaggggttgcctgaagac
accatgaaagccttggtttcttttagggatgctttgagatcggctaacgatttgcttcga
ttcggtagcgaaggaagcaagatatacctggtcctggagagggagcaagttatgagcaag
ttccatgacgtgacagctaaattggaacaagctttgagtggtatttcctacggaaaactt
gacatatcagatgaagttaaggaacaggttgagcttgttcttgctcagttcagacgagcc
aaaggacgggttgatgcccctgatgttgagctgtatgaggatctctcatcactttacgat
agcaatgatgcaccggcagatccagctattctaaaaagactggttgagaaattacagttg
gtgggaatagatgagcttgcacaagagtcaatagctttgcatgaaatggtaactgccagt
aatggggatcctggggcaagcattgaaaaaatgtctatgctattgaagaaaatcaaagat
tttgtgcagacagaaaaccccaacttggatgcccctgcaagagaaaagagtgttcctgca
agttgtagtgggcaaccctcaactgagaagaatcacaaggtcccagtcataccagatgat
tttcgttgtccaatatcacttgagttgatgaaagatcctgtcattgtttcaacagggcag
acttatgaacgttcatgtattgagaagtggctagaagctcatgggacatgcccaaagacg
caacaagctctctctaacaataccctcacaccaaactatgtacttcgtagtctcatagct
cagtggtgcgaagctaatggtctcgagcccccaaaacgacccagcagttctcgacccaat
aaagctacatctgcttgctcacctgcggaacgtactaagattgaaaccctcctgcgcaag
ctcacatgcggaaaccccgaagacaagagatctgccgctggagagatccgccttcttgca
aagcgcaatgctgataatcgtgtggctattgccgaggctggtgcaatccctctccttgta
aatctcctttcaacacccgattcccgcacgcaagagcatgctgtaacagctcttcttaat
ctttccatatgtgacgaaaataaaggaagcatcgtatcctctggagcagttcctggcata
gttcacgtgctcaagaagggaagcatggaagctcgtgaaaatgccgctgccaccctcttc
agcctctcagttgtggatggaaataaaattactattggtgctttgggggccattccacca
cttgtgacactgctgagtgaaggtaatcaaaggggtaagaaggacgctgcaacagcactg
ttcaatttgtgcatttaccaagggaacaaggggaaggcagtgagggctggtgttgtgcca
acactaatgcatttgttaacagagcctggagggggcatggtggatgaagcactggcaatt
ctagcaattttggctagccaccccgaagggaaggctgccattggtgctgcagaggcagtg
ccagttttggtagaggtcatagggagtggatctccaaggaacagagagaatgcggctgca
gttttagttcacttatgtggaggtgaccaacaacacctagtggaagctcaagagcttgga
gtcatgggtccactggtggagttggcacaaaatggcaccgaaagaggcaagcgaaaggct
gtacaactgctcgagcgtatgagtaggtttgttgagcaacagaaacaagctcaggagcta
gctgaggctgaagctctagccgaggctcaagctctagtcgaggctcaagctcagatgcag
caattacaactttcctccacagagactgtagatctcagatgcagctatcctccacaaatg
ctgtag
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