KEGG   Cannabis sativa (hemp): 115718986
Entry
115718986         CDS       T08987                                 
Name
(RefSeq) uncharacterized protein LOC115718986 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115718986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csav03400]
    115718986
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     115718986
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 RAWUL Beta-prop_WDR75_2nd Beta-prop_Vps41
Other DBs
NCBI-GeneID: 115718986
NCBI-ProteinID: XP_030503677
UniProt: A0A803R3Q3
LinkDB
Position
2:complement(18665248..18672933)
AA seq 764 aa
MHRVGSAGNTTNSTRPRKEKRLTYVLSDADDTKHCAGINSLALLKTTVFDGCDYLFTGSR
DGTLKRWALGEDAATCSATFESHVDWVNDCVLAGDNTLVSCSSDTTLKTWNGLSDGTCTR
TLRQHSDYITCLASAGKNSNAVASGGLGGEVFIWDIEAALSPVSRSGEAMEDDSSNGING
SGHPLPITSLRTINSSNNISVHSTQSHGYVPTAAKGHKESVYALAMNDSGSLLVSGGTEK
VVRVWDPRSGSKTMKLRGHTDNIRALILDSSGRYCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDFSLYLTDLSTRESLLLCTGEQPILQLALHDDSIWVAS
TDSSVTRWPAEGHNPQKVFQKGGSFLAGNLSFSRARVSLEGSSPVPVYKEPLLTIPGTPA
VVHHEILNNRRHVLTKDTAGSVKLWEITKGTVIEDYGKVPFEKKKEELFEMVSIPAWFTV
DTRLGSLSIHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLTKRRQRFG
NQASSTNGELPGREITTRSHAHPRIDGDSTAENDSVVYPPFEFSMISPPSIITEGSQGGP
WRKKITDLDGTEDDKELPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSTVQILTQGKLSA
PRILRIHKVINYVIEKMVLDKPLDSLNSDATFPPGLAGGPLQPATVGDGSFRSGMKPWQK
LKPSIEILCNNQVLSPDMSLATVRAYIWKKSDDLVLNYKVLQGR
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggtagcgcgggaaacacaaccaattccactcggcctcgcaaagagaag
agattaacatatgtgttaagtgatgctgatgatacaaagcattgtgcaggcataaatagt
ttggcattgttgaagactacagtatttgatgggtgtgattaccttttcactgggagccgt
gatggaacactgaaaagatgggcactgggtgaagatgctgccacttgctctgctacattt
gagtctcatgtggattgggtcaatgattgtgtacttgcaggagacaatacacttgtttct
tgttcttcagataccacccttaagacctggaatggcttgtctgatggaacttgtaccagg
actctgcgtcagcactctgactacattacttgtcttgcttcagcaggaaaaaatagcaat
gctgttgcctctgggggacttggaggggaggtgttcatatgggatatcgaagctgcactt
tctccagtttccaggtcaggcgaagcaatggaagatgattcttcaaatggtattaatggt
tctgggcacccactaccaattacaagtctacgtactatcaactcaagcaacaatatatct
gtccattctacacaatcacatggatatgttccaacagcagccaaaggccataaggagtca
gtttatgcattggcaatgaatgatagtggatcacttcttgtctctggtggcacagagaag
gttgtacgtgtttgggacccaagaagtggttcaaagactatgaaacttagaggacataca
gataacatcagggctttgattctggattcttctggcagatattgcttgtcaggatcctct
gattcaatgatcagactatgggatcttggtcaacagcgatgtgtgcattcctatgctgtg
cacacagattctgtttgggctcttgctagtaccccaacgtttagtcatgtatatagtggt
ggcagagacttttctttatacttgactgacttgtcaacgagagagagtcttctactttgc
actggggagcagcctattttgcaattggctttgcatgatgatagcatatgggttgctagc
acagattcttcagttactcggtggcctgctgaaggacataaccctcaaaaagttttccag
aaaggtggctcatttttagctggaaacttgtctttctcaagggcaagggtgtcattagaa
ggatctagccctgttccagtttataaagaaccacttcttacaattcctggaactcctgca
gttgtgcatcatgagattttgaataatagaagacatgtcttgacaaaggatactgctgga
tcagtaaagctctgggagattactaaaggaactgtaattgaggattatggaaaggttcct
tttgaaaagaaaaaagaagaactttttgaaatggtaagcattcctgcgtggttcaccgtg
gatacaagacttggaagtttgtctatccatttggataccccacagtgtttttctgctgag
atgtattcagcagatctgaatattgtgggaaagcctgaggatgataaggttaaccttgca
cgagaaactcttaaaggactcttggctcattggttaacaaaaagaagacaaaggtttgga
aaccaagcttcttctaccaatggggagttgcctgggagggaaatcactacaagaagtcat
gcccatccaagaattgatggagattctactgctgaaaatgattctgtggtctatcctcct
tttgaattttcaatgatatcccctccctccattattactgagggttctcagggaggtccc
tggagaaagaagattactgatttagatggaactgaagatgacaaggaattgccgtggtgg
tgtttggactgtgtcttgaataatcgcttacctcctagagaaaataccaagtgtagtttt
tatcttcagccttgcgaaggttcaactgttcagatcctcacacaaggaaaactgagtgca
cctcggattttgagaattcataaagtaataaattatgttattgagaagatggttcttgac
aagccattggatagtttaaattcggatgcaacatttcctcctggtcttgctggagggcca
ttgcaacctgcaacagttggtgatggatcttttcgttctggaatgaaaccctggcaaaag
cttaagccctctatagagattctctgcaacaatcaggttttgtcgccagatatgagctta
gctacagtgcgtgcttatatatggaagaaatctgatgatctggttttaaattataaggta
ttacaaggaaggtga

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