Cannabis sativa (hemp): 115719035
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Entry
115719035 CDS
T08987
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115719035
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115719035
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
115719035
NCBI-ProteinID:
XP_030503777
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Position
2:complement(501978..508029)
Genome browser
AA seq
1040 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDVQPGGLRVATGGGDHKVRIWNMKSLGRDVEKEESTQRLLA
TLRDHFGSVNCVRWAKHGRYLASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVTLT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FVASQSDDKTVIIWRTSDWSLAHRTDGHWTKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWTATFDFLGHNAPVIVVKFNHSMFRRNATSSQETKTTASAGWANGTSKAG
AKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDG
SVASFHFESKELGTRLSDSELDELKRSRYGDVRGRQANLAESPAQLLLEAASAKQAPSKK
PVSDVQQNPILTKPAVEIVLATKAPVPQVDERKKVGAGTGDGLNKVSTSTRRMASPVKQR
EYRRPDGRKRIIPEAVGMTPQQDNISSGAQCQALEFPPPSSDPRKEDNGPVPADSTVRES
SLRASTSKTPDLKERSGVTAKATITESLVIEKVSAAPGRDGTVNVEQSGTVRACTSTGTC
NAISIRVFDKKEGEDAVPVCLEARQREHALNDIVGLGSTFIMKETEINCTRGSELLWSDR
ISGNVTVLAGNANFWAVGSEDGCLQIYTKCGRRAMPTMMMGSAATFIDCDECWKLLLVTK
KGSMYVWDLFNRKCLLQDSLASLFVANTSASAKDAGSIKVISAKLSRSGSPLVVLATRHA
FLFDMSLMCWLRVADDCFPASNFASSWNLSSVQSGELAALQVDVRKYLARKPGWSRVTDD
GVQTRAHLESQLASSLALKSPKEYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMAE
STSLDPKNLAWDPFVLGIRKHKLLREDILPAMATNRKVQRLLNEFMDILSEYESVEADTQ
RKTQIAAPPCTTADPMDYVPSSATNRIDSTPATTVGVEIQTLPTTITKEKDNTTEQENYA
RKTDRVDLNSPLIDEMDACS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacctagttggataagacatgagggaatgcaaatattctccattgat
gttcaacctggtgggcttagggttgctactggtgggggtgatcataaggtcaggatatgg
aacatgaaatctctgggcagagatgtggaaaaggaagaatcaacacaaaggcttcttgca
acacttcgcgatcactttggatctgtcaactgtgttagatgggccaagcatggtagatat
cttgcgtctgggtctgacgatcaagtgattttagttcatgagaggaagcctggttcaggg
acaaccgagtttggtagcggggagcctccagatgttgagaattggaaagttacattgact
ttgaggggacatactgctgatgtggtggatctcaattggtctcctgatgactcgacattg
gctagtgggagtttagataacactgtacatatatggaatatgagcaatggcatctgcact
gctgttcttaggggtcactctagcctggtcaaaggtgtgacctgggatcccattggctct
tttgtagcaagtcaatcagatgataagactgttattatatggcgaacaagtgactggagt
cttgctcatagaacagatggtcactggacaaaatcgctcggatctacctttttcaggcga
cttggatggtccccttgtggtcattttattaccaccacacacgggttccagaaaccaagg
cactcagcacctgttctagagagaggggaatggactgcaaccttcgattttttgggacat
aatgctcccgtaattgtggtgaagtttaatcattctatgttccgtaggaatgccaccagt
tctcaggaaacaaaaactactgctagtgctggatgggcaaacgggacttcaaaggctgga
gctaaagaacctcaaccatataatgtaattgcaatcgggagtcaagatagaacgataact
gtttggacaactgcaagtcctcgtcctctctttgttgctaagcatttttttactcaaagt
gttgtggatttatcgtggagtcctgatgggtactcgctttttgcatgttccttggatggt
tcagtggctagtttccatttcgagtcaaaagaacttggcaccaggcttagtgattccgag
ttagatgaactgaaaagaagtcggtatggtgatgtaagaggtcggcaggcaaatttggct
gaaagtccagcacagttattgcttgaagctgcttctgccaagcaagccccgagcaaaaaa
ccagtttcagatgttcagcaaaacccgatacttacaaaacctgctgttgagattgtgctt
gcaacaaaggctcctgtgcctcaggttgatgaaaggaagaaagttggagcaggtactggt
gacgggttgaataaagtttcaacatctactcgtcgtatggcaagtcctgtcaaacagagg
gagtatagacgacccgatggtagaaagaggattattcctgaagctgtcggaatgactcct
cagcaggataacatttcttctggggctcaatgccaagcactggagttccctcctccatca
tctgatcccagaaaggaagataacggaccggttcctgctgactctactgtcagagaaagc
tcactaagagcttcaactagcaaaacaccggatttgaaagagcggtctggagtcactgca
aaggctacaattaccgagagtcttgttatcgagaaagtttctgctgctcctggtagagat
ggaaccgtaaatgtggaacagtcggggactgttagggcctgtacttcaactggtacttgt
aatgctatttcgattagggtgtttgacaaaaaggaaggggaggatgccgttccagtttgc
ttggaagcacgacaacgggaacatgctttgaatgacattgttggattgggaagcacattt
atcatgaaggaaactgaaattaattgcacaagggggtctgaattactttggtccgatagg
atctcgggcaatgtcactgttttagcaggaaatgcaaacttttgggccgtcgggtctgaa
gatggatgccttcagatttacacgaagtgtgggagacgtgctatgccaaccatgatgatg
ggatccgcggcaacatttatagattgcgatgagtgctggaagctgctattggtcacaaag
aaaggttccatgtatgtatgggacttattcaaccggaaatgtcttcttcaagattcgttg
gcatctttgtttgttgctaacacaagtgcatctgcgaaagacgcagggtcaatcaaagtt
atatcagcaaagttgtcgagatctggatcaccacttgttgttcttgccactcgccatgcc
ttccttttcgacatgagcctcatgtgttggttgagggttgcagatgattgtttccctgct
tcaaatttcgcaagctcgtggaatctaagttcagttcagagtggcgagttggctgccttg
caggttgatgttagaaaatatttggcccggaagcctggttggagcagggtgactgacgat
ggagtgcagacacgagctcatttagaatctcagttggcttcttcattggctttgaagtct
cctaaggaatatcgtcaatgtctactgtcgtatgtacgctttttggcaagagaagcagat
gagtctcgcctacgagaagtttgtgagagttttctcggacctccaactgggatggctgaa
tccacgtctttagatccgaagaacttggcttgggatccttttgtgcttggaataaggaaa
cataaactcttaagggaagatattctacccgcgatggcaacaaatagaaaagttcagcgt
ttgctcaatgaatttatggacattctctcggaatatgaaagtgttgaagctgacacacaa
cgaaaaactcagattgctgctccaccatgtacaacagccgatccaatggactatgtacca
tcatcagcaacgaatcgaatagattctactcctgcaacaacagttggagtcgagattcag
actcttcctactaccataacaaaagaaaaagacaatacaacagagcaagaaaattatgct
cgaaaaacagatcgagttgatctaaactccccattgatagacgaaatggatgcgtgttca
tga
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