Cannabis sativa (hemp): 115719043
Help
Entry
115719043 CDS
T08987
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03030
DNA replication
csav03410
Base excision repair
csav03420
Nucleotide excision repair
csav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115719043
03410 Base excision repair
115719043
03420 Nucleotide excision repair
115719043
03430 Mismatch repair
115719043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115719043
03036 Chromosome and associated proteins [BR:
csav03036
]
115719043
03400 DNA repair and recombination proteins [BR:
csav03400
]
115719043
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115719043
DNA Replication Termination Factors
ELG1-RFC complex
115719043
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115719043
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115719043
Check point factors
HRAD17(Rad24)-RFC complex
115719043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
AAA_5
Sigma54_activ_2
AAA_22
AAA_2
DUF815
RuvB_N
AAA_29
RsgA_GTPase
Mg_chelatase
ABC_tran
AAA_23
AAA_24
nSTAND3
T2SSE
AAA_11
ATPase_2
TsaE
FtsK_SpoIIIE
AAA_16
nSTAND1
RNA_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
115719043
NCBI-ProteinID:
XP_030503787
LinkDB
All DBs
Position
2:74454124..74474494
Genome browser
AA seq
378 aa
AA seq
DB search
MLWVDKYRPKTLDHALVHEDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALIRQMFG
ASAEKVKVENRTWKVDAGSRTIDLELTTLSSTNHVELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGRKGYKVLVLNEVDKLSREAQNSLRRTMEKYSAYCRLILCCNSSSKVSEAIRSR
CLNVRINAPSEEQIVKVLEFIGKKEGLHIPSGFAARLAEKSNRSLRRAILSFETCRVQQY
PFTSNQTIPPMDWEEYISEIASDIMKEQSPKRLYQVRLKIYELLVNCIPPEIILKVNAFH
FIAHYKFSSFFIQLLVLHQRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEA
FVAKFMSIYKSFLIATFG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaaataccgtcctaaaaccctagaccacgctttggttcacgaagat
gttgcccaaaacctcaagaagcttgttactgagcaggattgcccgcatttgctcttctat
ggcccatctgggtcgggcaaaaaaaccctaatcatggccctcatccgtcagatgtttgga
gcaagtgctgagaaggtgaaggttgaaaatagaacatggaaagttgatgctggaagtaga
actattgatttagagctgacaacattgtcaagtaccaaccatgtggaattgaaccctagt
gatgcaggatttcaggacagatatatagttcaagagataattaaagagatggctaagaat
agaccaattgacacaaaggggagaaaaggatacaaagttttggtgcttaatgaagttgat
aaactttcaagagaagcacagaattctcttagaagaacaatggagaagtatagtgcctat
tgtcgactaattttatgctgtaacagctcttcaaaagttagtgaagccatcaggtctcgc
tgtctgaatgtgagaatcaatgcaccatcagaagaacagattgttaaggtacttgagttc
attggtaaaaaagaaggcctgcacattccatctggatttgctgctcgtttagctgaaaaa
tcgaatcgaagtttaaggagagccatattgtcatttgaaacttgccgtgttcaacaatat
cctttcacaagtaaccaaacaataccaccaatggattgggaggaatatatttctgaaatt
gcatctgacataatgaaagagcaaagcccgaaaaggctttatcaggttcggcttaaaatc
tatgagctacttgtcaattgtatacctccggagatcatcttgaaggtaaatgctttccat
tttattgctcactacaaattttcatccttttttattcaacttttggtgttgcatcagagg
ctgctttacgagttactgaggaaattagacgcagaattgaagcacgaggtttgccactgg
gcggcatattatgaacacaggatgcgacttggacaaaaagctatatttcacattgaagcg
tttgtggccaagttcatgagcatttacaagtcttttcttattgcaacatttggctga
DBGET
integrated database retrieval system
