Cannabis sativa (hemp): 115719118
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Entry
115719118 CDS
T08987
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115719118
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115719118
Factors involved in mRNA localization
Other mRNA localization factors
115719118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
115719118
NCBI-ProteinID:
XP_030503899
LinkDB
All DBs
Position
2:10739385..10759654
Genome browser
AA seq
1285 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQAQVQGPGIWVLTERGATESPIEYNDVSAYRLSLSEDTKA
LNQLNALIHEGKEMSSVLYTYRSCVKALPQLPESMKQSQGDLYMETYQVLDLEMSRLREI
QQWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWHDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAIMKELSMYFQKFSSQTRLLTIPAPHELPLREAQDYQRHYLIINHIGSI
RAEHDDFTIRFASAMNQLLLLKSSDSADVEWCKEVKGNVYDMVVEGFQILSRWTARIWEQ
CAWKFSRPCKDVPVELQEASASFSDYEKVVRYNYSAEERKALIELVSYVKSIGSMMQQCD
TLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTGKSES
EMHSLQHGGEESKGNVFFPRPVAPTASQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEIP
VNDMKQLETFFYKLSFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWM
LVDYVLESQNTSLIESILMPFDIYNDSAQQALIVLKQRFLYDEIEAEVDHCFDLFVSKLC
DTVFTYYKSWAASELLDPSFLFASDNGDKFSIQPMRFTALLKMTRVKLLGRTINLRSLIT
ERMNKVFRENLEFLFDRFESQDLCAIVELEKLVDILKHAHCLLSTDLSIDSFSLMMSEMQ
ENISLVSFSSRLASQIWSEMQNDFLPNFILCNTTQRFIRSSKVPHVPVQKPSVPYAKPNF
YCGTQELNLAHQSFARLHSGFFGVPHMFSIVKLLGSRSLPWLIRALLDHISNKLTTLEPM
ITGLQESLPKSIGLLPFDGGVTGCMRLVKEHLNWGTKSELKSEVLRGIKEIGSVLYWMGL
LDIVLREVDTWHFMQTAPWLGLLPSADGQVLHSQDGGDSPIVSLFKSVTAAILSKPGCPN
PTSFNTLSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSAIPKTGFVDITTS
KDFYRIYSGLQIGYLEESEQVSSGNRELLGDSVAWGGCTIIYLLGQQIHFELFDFSHQVL
NVAEVETVSSVQSPRNPQFSQGWEVLIESMKKARRLNNHVFSMLKARCPLEDKTACAIKQ
SGAPLHRIKFENTISAFETLPQKGA
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgtggaagaagccattgcggcgctgtctacattctcactcgaggatgag
caagcacaagtgcaaggaccaggaatttgggtgttaactgagagaggagcaactgaaagt
ccaattgagtataatgatgtttctgcatatcgcctatctctatcagaggacacaaaagct
cttaatcaattgaatgctcttattcatgaaggaaaggagatgtcatcagttctttataca
tatcgtagttgtgtcaaagcgctacctcagcttcctgaatccatgaaacaaagtcaaggt
gacttgtatatggaaacttatcaagttctggatttggaaatgagtcgtctgcgtgaaata
cagcaatggcaagcatcagctgcttctaaattagctgctgacatgcaacggttttctagg
cctgagcgacgcataaatggtcctacagtaactcatctgtggtccatgttgaagttactt
gacgttttagttcaactagatcatcttaaaaatgctaaagcaagtatacctaacgacttc
tcttggtataaaaggacattcacacaagtcagtgttcaatggcatgacactgattcaatg
agagaggagttagatgacttgcagatttttctgagcacacgatgggctattttattaaat
ttgcacgttgagatgttccgggtgaacaatgtggaggacattcttcaagttctcatagtc
tttgctgttgagtcactggagttggattttgcgcttctgttcccagaaagacacattcta
ctccgtgttttgcctgttcttgttgttttagcaacatcatcagaaaaggatagtgagtct
ttatacaaaagggtgaaaattaacagactgataaacatatttaagaatgatccagtcatt
cctgcatttccagatcttcatctttctcctgctgcaattatgaaagagttgtcaatgtat
tttcaaaaattttcttctcaaacccgtcttcttactattcctgcacctcatgagcttcca
ctgcgcgaagcacaagattatcagagacattatctgatcattaatcacattggatccatc
cgtgccgagcatgatgactttactattcgctttgcttctgccatgaatcagctcttgttg
ctgaaatcatcagatagtgctgatgttgagtggtgtaaagaagtcaagggcaacgtatat
gatatggtcgttgaagggtttcagattttaagcagatggactgcacgtatctgggaacaa
tgtgcatggaagttttctcggccctgcaaagatgttcctgtggaattacaggaggcatca
gcatctttttctgactacgaaaaggttgtacgatataattacagtgcagaggaaaggaaa
gccctaattgaacttgttagctatgttaaaagtattggatccatgatgcaacaatgtgat
acattggtggctgatgctttatgggaaacaatacatgcagaggtccaagattttgttcaa
aatacattggctactatgttgaggactacctttcggaagaagaaggatctctctaggatt
ctttctgatatgcggaccctttcagcagattggatggcaaacacaggcaagtctgagtct
gaaatgcattctttgcagcatggaggagaagaaagcaaaggaaatgtatttttccctagg
cctgttgcaccaactgcttctcaggtccattgcttacagtttctgatatatgaggtggtc
tctggtggtaatctgaggaagcctggagggctctttgggaatagtgggtctgagattcct
gtcaatgatatgaaacagttggaaaccttcttttacaagctcagttttttcttacatata
ttggattactcagcaacagttgcaactttgacagaccttggcttcctatggtttagagaa
ttttatttggaatcatctcgtgttattcagtttcctattgaatgctctcttccctggatg
ttggtggattatgttcttgagtcacagaacacgagtcttattgagagtattttgatgcca
tttgacatctataatgattcagcccagcaagcattaattgttttgaaacaacgattcctc
tatgatgaaattgaggctgaggtggatcactgctttgatttatttgtttctaaactgtgc
gacactgtatttacatattacaagagctgggcagcgagtgaattacttgatccctcattc
ctcttcgcatcagataatggtgataaattttctatccaaccaatgaggtttactgcactc
ctaaagatgactagagtgaagctacttgggaggacaattaacttgagaagtttgattact
gagcggatgaataaagtttttagggagaatcttgaatttctctttgaccgttttgagtct
caggacctgtgtgctatagttgagttggaaaagttggtagatattttgaagcatgctcat
tgtttgctatcaacagatctttcaatagattccttcagtttgatgatgagtgagatgcaa
gagaatatatctctcgtgtcattttctagtagacttgcttcccagatatggtctgagatg
caaaatgatttcttgccaaactttatcctttgcaacactacccagcgttttattagatca
tcaaaggttccacatgttcctgtgcaaaagccatcagttccctatgcaaagcctaatttc
tactgtggtacacaagaattaaatttggctcatcaaagttttgcacggcttcatagtggt
ttctttggagttccccatatgttctcaattgtcaagcttctagggtctagatccctgccg
tggcttataagggcacttctggatcatatatccaataagctaacaacacttgaaccaatg
atcaccggattgcaagaatcattgccaaaatccattggattgcttccttttgatgggggt
gtgacaggttgtatgaggcttgtaaaagaacatcttaattggggaacaaaatcagagctc
aaatcagaggttcttagggggataaaggaaattggaagtgtgttatattggatggggctt
cttgatatagtgttgagagaagtagatacctggcacttcatgcaaacagctccttggttg
ggtctacttcctagtgctgatggacaagtattacattctcaagatggtggagatagtcca
attgtcagtctatttaaatcagtcactgctgcaattttatctaagccagggtgcccaaat
ccaacctctttcaacaccctatcaaaacaggcagaagctgcagatcttttatacaaggca
aacatgaatactggaagtgtgcttgaatatgccctcgcctttacaagtgcagcattggat
aagtattgcagtaaatggagtgctattcccaaaacaggatttgttgacattacaacttca
aaggatttctacagaatatacagtgggcttcaaattggatatttggaagaatctgagcaa
gtatcttcaggcaatcgtgaattgctgggtgattcagtagcatggggtggttgcacgata
atttatttgcttgggcagcagatacatttcgagcttttcgatttttcgcatcaagtcctc
aatgttgcagaagtagagactgtatcatctgtacaatcacccaggaatcctcagttttcc
cagggatgggaggtcctaatagaatcaatgaagaaagcaaggaggctaaacaatcacgtc
ttttccatgctaaaagcacgttgccctcttgaagacaaaacagcttgtgctataaagcaa
agtggcgcccctctgcatcggataaaattcgaaaataccatctcggcctttgaaacactg
ccacagaaaggggcctaa
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