Cannabis sativa (hemp): 115719129
Help
Entry
115719129 CDS
T08987
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115719129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115719129
03036 Chromosome and associated proteins [BR:
csav03036
]
115719129
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115719129
Coactivators
SAGA/TFTC/STAGA complex
115719129
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115719129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
ParG
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
115719129
NCBI-ProteinID:
XP_030503913
LinkDB
All DBs
Position
2:complement(91668698..91673927)
Genome browser
AA seq
972 aa
AA seq
DB search
MDPSLMKKLLEDDEDESMHSGADVEAFQAALNRDIGGDASHSLPSEPSSAGLSLSQGSNN
TTTTTTTATTTQSLPQFPGATLDESANFQIQQDQNNAQPQSMNSSVQEQVVNHGPVPDQQ
QQQHQQQQQQQHQQQQQQQQQQQQQQQQHNSINNTSQGPKDLGLPPMVSQDEPQQKHTEQ
TPLQTPQATGMQMSGKTPVLMQEPDRPPPPENESQYVKLQKMSNQQATVSDQPTNPPQAR
SKQVPFGLLLPVLMNQLDRDKGMQLQELFLKLKREEITKESFVRLIRGVVGEQMLKLAVH
AVQSQLQPQASMRKQTQGMPSINTGTTHFTDPRSFAQVHQKGAGSSADVSHIPASMGQLQ
TNPSHQIMDKNVQMLREADRQSDSHGKLVNQMPLSTVVTPNQERDSMQHGFNRQQQLQHQ
QQQLHFPQTSFSSFGNTGSRSHLFSGTSANTSTLSVKSQPHDLQMRQISQHQGMGLGSAQ
SGGETHGANVLGVSKLGQNPSLSHFANNSMSYVKPEPVEQAIELQRKTPSSSQASPSVSA
AKFEQGNTFSGTLKDESLEKQPSRMGFPTSAGVVPSSSTSMAPPHSLSSSMAMQPDPSVP
LGARAPSGITPAGINNKTPPKKPSVGQKKPLEALGSSPPPAGKKQKVTGNFSDQSIEQLN
DVTAVSGVNLREEEEQLFSVPKEDSRVTEASRKAVQEEEERLILQKNPLQKKLAEIMAKC
GLKNISNDVERCLSLSVEERMRGLIENLIRLSKQRVDSEKSRHQTITTSDIRLQIMTMNM
KAREEWEKKQAEAEKLRKQNDPDGNNGVDGDKEKDDFRSKSFKGQQPNKEDDDKMRTTAA
NVAARAAVGGDDMLSKWQLMAEQARQKREGGTDAASGSQPGKDVSRKTSSTPGKTTKDHH
DAEKRSGTTFSAASGGRKFGRSQGVSPQTKVPRSNITIKDVIAVLEREPHMSRSPLTYRL
YEKIRSDPASAE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctcttatgaagaagcttctcgaagatgacgaggacgaaagcatgcattcg
ggggctgatgtggaagcttttcaggctgctctaaatagagatattggcggtgatgcctcc
cattctcttccctctgaaccaagctctgctggtttgtctttgtcccaagggagcaataac
actactactactactactactgctactactactcagtcattaccacagttcccaggggct
actttagatgaaagtgcaaactttcaaattcaacaagaccagaacaatgcacagccacaa
tcaatgaattcatctgtgcaggagcaagtagtgaatcatggacctgtgcccgatcaacaa
cagcaacaacatcaacaacagcagcagcaacaacatcaacagcagcagcaacaacagcaa
caacaacagcagcagcaacaacaacataacagtattaataatacctcacaaggacccaag
gaccttggtttgcctcctatggtgtcccaagatgaaccacaacagaagcatactgaacaa
actccccttcagactcctcaagctactgggatgcagatgtctggaaaaactcctgtcttg
atgcaggaaccagacagaccacctcctccagaaaatgaatcacagtatgtgaaacttcaa
aagatgagtaatcaacaggctacggtgtccgatcagccgaccaatccaccacaagctcgt
agtaaacaggtgccctttggcttgttattgcctgttttaatgaatcaacttgatagagat
aagggtatgcaacttcaagaattatttcttaaactcaagagggaagaaatcaccaaagag
tcatttgtccgtctcattagaggtgttgttggggagcagatgcttaaattagcagtacat
gcagtgcaatcacagctgcagccccaagcatcaatgcgtaaacagactcaagggatgcca
tctatcaatacagggacgacacattttactgatcctcgttcatttgcacaagtacatcag
aagggcgccggctcttctgcagatgtctcacacatacctgcttcaatgggccaattacag
actaatccaagccaccaaattatggacaaaaatgttcaaatgttaagagaggcagatcgt
cagtcagactctcatggaaagcttgttaatcaaatgcctttgtcaactgtggtaaccccc
aatcaagagagagattctatgcagcatggatttaacaggcaacagcaacttcagcatcaa
cagcaacagttgcactttccacagacatccttttcctcctttggaaataccggtagtcgt
tctcacttgttttctggcacaagtgccaatacttcaacattgtctgtcaaatcgcaacca
catgatttacaaatgaggcaaatttctcaacatcaaggcatgggattgggatcagctcag
tcaggtggagaaacacatggtgcgaatgtcttgggtgtatccaaattggggcaaaatcct
agtctttctcattttgcaaataattcaatgtcttacgtaaaacctgaaccagttgagcag
gctatcgagcttcagcgcaaaactccatcatcttcacaggcatcgccttcagtttctgcc
gcaaagtttgaacagggaaacacattttctggaactttaaaagatgagtctttagagaag
cagccatcaagaatgggttttccaacttctgctggggttgttccttcatcatccacaagc
atggcacccccacattcactttcttcctccatggctatgcaaccagatcccagtgtccca
ttaggagctcgggcaccttcaggaatcactccagctggaattaataataagacacctccg
aaaaaaccttctgttggccagaagaaaccgcttgaagcacttggttcttcaccaccacca
gcaggtaagaagcaaaaagtcactggcaacttttccgatcaaagcattgagcaactcaat
gatgttactgccgttagtggagttaaccttagggaggaggaagaacagctcttttctgta
cccaaggaggatagccgagtaaccgaagcttctcgaaaagctgtgcaggaagaagaagaa
aggttgatcttgcagaagaatcccctgcagaaaaaattagcagaaatcatggccaaatgt
ggtttgaaaaacataagcaatgatgttgagcggtgcttatcactgtctgtggaggaaagg
atgcgcggactgattgaaaatctaatcagactgtcgaagcagcgcgtcgattctgagaag
tcaagacaccagactatcaccacatcggatataaggcttcaaattatgacgatgaatatg
aaagctagggaggagtgggaaaaaaaacaggctgaggcagaaaaacttcgtaaacaaaat
gatcctgacggtaacaatggagttgatggtgataaggagaaagatgactttcgttctaaa
tcgtttaagggtcaacaacctaacaaagaggatgatgacaaaatgaggacaacggcggca
aatgtggctgcacgagctgctgttggaggagatgatatgctttcgaaatggcagcttatg
gctgaacaagctcgacaaaaacgtgaaggaggaacagatgctgcatctggctctcagcca
ggtaaagatgtgagccgaaaaacttcatcaacacctggaaaaactacaaaagaccatcat
gatgctgagaaaagaagcggtacaacattttctgctgcttctggtggaagaaaattcgga
agaagccaaggcgtgtcgcctcaaacaaaggtgccccgtagtaatataacaatcaaggat
gtaattgctgtactcgaaagggaacctcatatgtctcggtctcctcttacatatcgtttg
tatgagaaaattcgatctgacccggcttctgctgaatga
DBGET
integrated database retrieval system
