Cannabis sativa (hemp): 115719237
Help
Entry
115719237 CDS
T08987
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115719237
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115719237
Enzymes [BR:
csav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115719237
Protein phosphatases and associated proteins [BR:
csav01009
]
HAD phosphatases
Fcp/Scp phosphatases
115719237
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115719237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
HATPase_c_2
Motif
Other DBs
NCBI-GeneID:
115719237
NCBI-ProteinID:
XP_030504054
LinkDB
All DBs
Position
2:complement(51477875..51482856)
Genome browser
AA seq
706 aa
AA seq
DB search
MAKNQPPLSVKDAVYRIQLSLLQGVANENQLSTAGSVISRSDYNDVVTERALANLCGNPL
CSKPLPSDRPRKSRYRISLKEHKVYDLQETYMYCSSDCVVNSGTFGRSLNEERCSILDSS
KIDAVLALIGDSSSKNEVGLGKDGDLGFSKLTIKENTETHDGKLNLEDWAGPSNAIEGYV
PQRERNFKSVGSKISKKGSKAKNPVLINDMEFSSTLFTEVEYTVSKTPLSSKNTGFDIQL
KEPQEKLGKKTENQFTLLDTSFNPMSSDLETKTKQMEVGSCKAVSRDELGIQEMPSTSAS
SQLGSHSSSEKVGEVSHKVTGATLKSSLKASRKNKLSRSVTWADEKSDSCGKSNLCEVRE
IEDKKEATSILGKKGKVPLKPSGSLKAGTSMSWAGENCDTKVCKDAYEVREIKDLNQTSD
MLSMDIGDGDVLRLASAEACVNALNEASEAVSAGEFEVSDAMSEAGIIILPHPEDANGGV
SLEDKDTSEPEKAPSKWPKKPVNQHSDVFNREDSWFDTPPEGFSLTLSHFAQMWNALFTW
TTSSTLAYIYGRDESVHEEYLSVNGKEYPQKIALGDGRSSEIKQTLAGSLARALPGLVAD
LRLPVPVSSLEQGMGRLLETMSFVDALPPFRIKQWQVIVLLLIEALSVFRLPALTPHMTN
QRVLFHKVLDGAQISAAEYEIMKDLMLPLGGTPHFSDQNGVLNERT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaccaacctccactttctgtcaaagacgccgtctacagaatccaactctcc
cttctccaaggcgttgccaatgagaaccagctttccactgctggctccgtcatctcccgc
tccgactacaacgacgtcgttaccgagcgagctctcgctaacctctgcggtaaccctctt
tgctccaaaccccttccttccgatcgacctcgtaagagtcgttaccgtatctcactcaag
gagcacaaggtctatgatctccaggagacttatatgtattgctcctccgattgtgtggtc
aatagcggtacctttggtaggagtttgaacgaagaaaggtgttcgattttggattcttcc
aagattgatgcggttttggcgttgattggggattcgagttcgaaaaatgaagtgggttta
ggtaaagatggggatttgggtttttctaagctaacgattaaggagaatacagaaacccac
gatgggaaattgaatttggaggattgggctggtccttctaatgcgattgaaggttatgta
ccgcagagagaacggaatttcaagtcggtgggttcgaaaatttccaagaaagggtctaaa
gctaaaaatccggttcttatcaatgacatggagttctcgagtactcttttcacagaagtt
gaatataccgtgtccaaaacaccattgagctcaaaaaataccggttttgatattcaacta
aaagaaccacaagaaaagttggggaagaagactgaaaatcagtttactttattggacaca
tcgtttaatcccatgagcagtgatttagaaacgaaaaccaaacaaatggaagtggggagt
tgtaaagctgtttcaagagatgagcttggtattcaggagatgccttcaacttcagcgtct
tcccaacttggctcgcattcaagctctgaaaaagtaggagaggtatctcataaagtgact
ggagctactcttaaatcgtctctaaaagcttctcggaaaaacaaacttagtcgctctgtt
acatgggctgatgagaaatctgatagctgcgggaaaagtaatctttgcgaggttagagaa
attgaagataaaaaagaagctacttctatattaggcaagaaaggcaaagttcctcttaaa
ccttcggggtcactgaaagctggtacctccatgtcttgggctggtgaaaattgtgatacc
aaagtgtgtaaagatgcttatgaggttagagaaataaaagatttgaatcaaacttctgat
atgcttagtatggacattggagatggtgacgtgttgcgccttgcatcagcagaggcttgt
gtaaatgcattgaatgaggcatcagaagctgtttccgctggagaatttgaagtcagtgat
gcaatgtctgaagctggaattattatattacctcatccagaggatgcaaatggaggagtg
tctttggaggacaaagatacatctgaaccagaaaaagctccttcgaaatggccaaaaaaa
cccgtaaatcagcattctgatgtgtttaatcgcgaggattcttggtttgatacgccacct
gaggggtttagtttaacattatcacattttgcacaaatgtggaatgcactatttacatgg
acgacatcatccactttggcttatatatatggaagggacgaaagtgttcatgaggagtat
ttatcagttaacggaaaggagtatcctcaaaagattgccttaggagatggtcgttcttct
gaaatcaagcaaactcttgctggttctcttgctcgagccttacctggacttgttgctgac
ctcaggctgccagttccagtgtctagtttggagcaaggaatggggcgtttattggaaaca
atgtcttttgttgatgcactgccaccattcagaataaagcaatggcaagtaattgtcctt
ctcctcattgaggctctctctgtctttagacttcctgcacttacaccacacatgacaaat
caaagggtgttgttccataaggtactggatggtgcccaaattagtgctgcagagtacgag
attatgaaggatttgatgctaccgcttggcggaactccccatttctcagatcagaacggg
gtgcttaacgaaagaacttag
DBGET
integrated database retrieval system
