Cannabis sativa (hemp): 115719253
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Entry
115719253 CDS
T08987
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00730
Thiamine metabolism
csav01100
Metabolic pathways
csav01240
Biosynthesis of cofactors
Module
csav_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
115719253
Enzymes [BR:
csav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
115719253
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
115719253
NCBI-ProteinID:
XP_030504075
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Position
2:complement(58802809..58807864)
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AA seq
644 aa
AA seq
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MASVHSALTSVVFKNGNHSSPKKFPSSSFLPGFDIMGRVSCPHKREMSGPRATLTFDPPT
TNEGKDKQRKHTVDPASPDFLPLPSFEQCFPKSTKEQREVIHEQTGHVLKVPFRRVHLSG
DEPHFDTYDTSGLQNIDPRVGLPKLRKDWINKREKLGAPRYTQMYYAKQGIITEEMLYCA
TRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEEEV
YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLNWE
VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY
EHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNE
GPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL
CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPYAQAWDDALSKARFEFRWMDQF
ALSLDPMTAMSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGTEEAVQ
RGMDAMSAEFLSAKKTISGEQHGEIGGEIYLPESYVKSAERNIE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttcatagtgccctgacatcagttgtgttcaagaatggaaaccattcttct
ccaaaaaagttcccaagtagttccttcttacctggatttgatattatggggcgtgtttca
tgtccacataaaagggaaatgtcaggccctagagccacattaacctttgatcccccaaca
accaatgagggtaaggacaaacaaaggaagcatacagttgatcccgcttctcctgatttt
ctgccacttccatcctttgaacaatgttttccaaagagcacaaaagaacaaagggaagtt
atccatgaacaaactggccatgtacttaaagttccatttcgacgtgtccacctttctggg
gatgaacctcattttgatacctatgataccagtggtcttcaaaacattgacccacgtgtt
ggactccctaaattacgtaaagattggatcaacaagcgtgaaaaattaggtgcacctaga
tacacccaaatgtactatgctaagcagggaatcataactgaggaaatgttatattgtgcc
actcgtgagaatcttgaccctgagtttgtgaggtcagaagttgctcgtgggcgggcaatc
atcccatccaataagaagcacttggagctggagccgatgatagtgggaagaaaatttttg
gtcaaagttaatgcaaacattgggaactctgctgttgcaagctccattgaagaggaagtt
tacaaagtccagtgggcaaccatgtggggtgctgacactgtcatggatctctctacaggt
cgccatatccatgagactcgtgaatggattctcaggaactctgctgtaccagtagggact
gtaccaatttatcaagcactcgaaaaagtgaatggaattgcagaaaatctaaactgggaa
gtgttcagagacacccttattgaacaagctgagcagggtgtcgattacttcactatccat
gctggagtactactaaggtatattccactaacagcaaagcgcatgacaggaattgtttca
cgtggaggatccattcatgcaaaatggtgtcttgcttatcacaaagagaattttgcttat
gagcactgggatgacattctcgacatctgtaatcagtatgatgtggccttgtcaattggt
gatgggctgagacctgggtctatatatgatgccaatgacactgctcaattcgcagagctt
ttaactcagggagaactgactcgcagagcatgggaaaaggatgtacaggtaatgaatgaa
gggcctggacatgttcccatgcataagattcctgaaaacatgcagaaacagctagaatgg
tgtaatgaagcacctttctacacccttggtcctttaacaacagatatcgctcctggatat
gatcacattacctctgccattggtgcggccaacataggtgctctgggcactgcacttctc
tgttatgtcactcccaaagaacaccttgggttgcccaatcgtgatgatgtgaaggctggg
gtcatagcatataagatagctgcccatgcagctgatttagccaaacaacatccgtatgct
caagcctgggatgatgcattaagtaaggcaagatttgagttccggtggatggaccagttt
gctttgtcactggacccaatgactgctatgtccttccatgatgagaccttgccatcggat
ggtgctaaggtagctcatttctgctccatgtgtgggccaaaattctgctctatgaagata
actgaagatgtgaggaaatatgctgaggagcacggctatgggactgaggaagctgtgcag
cgaggaatggatgctatgagtgctgagtttttgtctgctaagaaaactattagcggggaa
caacatggtgagattggtggagaaatctacttgcctgagagctatgtcaaatccgcagag
aggaacattgaatga
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