Cannabis sativa (hemp): 115719304
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Entry
115719304 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115719304
KO
K07573
exosome complex component CSL4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115719304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115719304
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115719304
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115719304
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
115719304
NCBI-ProteinID:
XP_030504146
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Position
2:complement(9569387..9572134)
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AA seq
196 aa
AA seq
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MEEDDANMVTPGEVLGKASDFKAGKGAYVSPHNHIIYASLTGLRRIQYPPLDAPDQRPTI
EVTGHKAHGVVPEPGSIVIGRVTRVMARMASLDIMCVGTKSVPEKFSGIIRQQDVRATEI
DKVDMHTSFRVGDIVRAIVLSLGDARAYHLSTAKNELGVVSAESAACATMVPVSWTEMQC
PLTGQIEQRKVAKFGG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgacgcaaacatggtcacgccaggtgaagttctgggtaaagcttcggat
ttcaaagcagggaaaggtgcttatgtgtctcctcacaatcacatcatctatgcttccctc
actggacttcgccgcattcagtatcctcctcttgatgcacccgaccagagacctactatt
gaagtaactggtcacaaggcacatggggttgttccagagcctgggtctattgtaattggt
cgagttactagagtgatggccagaatggcttcgcttgacattatgtgtgtaggcacaaag
tctgtgccagagaaattttccggtataattaggcaacaagatgttagagcaacagagatt
gataaagtcgatatgcacacatcatttcgtgttggcgacattgtgagagctattgtgcta
tctcttggtgatgcaagggcatatcatctgtccactgcaaaaaatgagttgggcgttgta
tctgcagagagtgcagcatgtgcaactatggttccagtcagctggacagagatgcaatgt
ccattaaccgggcaaattgagcaaagaaaggttgctaagtttggaggatga
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