Cannabis sativa (hemp): 115719306
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Entry
115719306 CDS
T08987
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115719306
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115719306
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115719306
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
115719306
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class I (G)
115719306
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115719306
Prokaryotic type
115719306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
DALR_2
tRNA-synt_1
DUF2067
Folliculin
DUF7813
Anoctamin
Motif
Other DBs
NCBI-GeneID:
115719306
NCBI-ProteinID:
XP_030504147
LinkDB
All DBs
Position
2:91049060..91054300
Genome browser
AA seq
539 aa
AA seq
DB search
MAKEELRVYNSMTQQKEIFKPKVSGKVGMYVCGVTAYDLSHLGHARAAINFDVLYRYLQH
LGYEVTYVRNFTDVDDKIIRRANEIGEDPLSLSNRFCQEYLSDMDALQCLLPTHQPRVSD
HLEEIKDMISLIIKNDYAYAVDGDVFFAVEKLPNYGQLSGQKLENNRAGERVAVDSRKRN
PADFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSAKYLTFKFDIHGGGIDLIFPHHEN
EVAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIREIIGRYHPLSLRHFVLSAH
YRSPLNYTFSQLESSSDAVYYIYQTLQDCEDSLSMFQEGILKEGADQSGKTIQLDPADAQ
ECIRKLRSEFETKMNDDLNTAHILTGAFQDALKLINSSINAVKKKQPKKQKQQKQKQQDQ
ADQEEQQKQQQLLMNQSLVEVKQEIISFLSILGLLSSHSYTEVLQQFKDKALKRADLVES
DVTNLIEARAEARKNKEFAKSDQIRADLSAKGIALMDLGKETIWRPCVPVEQQQQSVKT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaggagttaagggtttacaattccatgactcagcagaaggagatcttcaag
cctaaggtttcgggaaaggttgggatgtatgtctgtggagttactgcctacgatcttagc
catctcggccatgcccgagctgccattaattttgatgtcctctacagatatttacagcac
ttgggttatgaagtcacatatgtccgaaatttcactgatgttgacgacaagattattcgt
cgggcaaatgagattggggaagatccactaagtttaagtaatcggttctgccaagagtac
ctttctgacatggatgctcttcagtgtctccttcctacccatcagccacgtgtatctgat
catttggaagaaataaaggatatgatatctctgatcatcaagaatgactatgcatatgca
gttgatggagatgtattctttgctgttgaaaaactcccaaattatggtcaattgtctgga
caaaagttggaaaataatagagctggggagcgagtggctgtcgattcaagaaagcgaaat
ccagctgactttgcactgtggaaggctgcaaagcctggtgagcctagttgggacagccct
tggggtcttggaagacctgggtggcatattgaatgcagtgctatgagtgcaaaatattta
acattcaagtttgatattcatggtggtggaattgacttgatctttccacatcatgaaaat
gaggttgcccagagttgtgctgcatgccaagagagcaatgtgagttactggatgcataat
ggacatgttacgaacaacaatgagaaaatgtcgaagtccttgggtaacttcttcactatt
cgtgagattattggaaggtaccatccattgtcgttgagacactttgtgttaagtgcacat
taccgttctcctctcaattacactttctcccagctggagagttcttcagatgctgtttat
tacatttatcagactttgcaagactgtgaggattcattatcgatgtttcaagaagggatc
ttgaaagaaggagcagatcaaagtggcaaaaccattcaactcgatcctgctgacgctcaa
gaatgcattcgtaagctacgcagtgaattcgagactaaaatgaatgatgacttgaacact
gcgcacatattgactggtgcgtttcaagatgccttgaaattgataaacagttccatcaac
gcagttaagaagaagcaaccgaagaaacaaaaacagcagaagcagaagcagcaggatcaa
gcggatcaagaagaacaacagaagcagcaacagttgttaatgaatcaatctcttgttgaa
gtgaagcaagaaattatatcatttctaagtattctgggtttactatcctcacattcatac
actgaggtactacagcagttcaaagataaggctttgaagcgagctgatttagttgaaagc
gatgtgaccaacttgattgaagcgcgagcagaagctagaaaaaacaaggagttcgcaaag
agtgatcagatcagagccgatttaagtgcgaagggaattgcgctcatggatctaggtaag
gaaacaatttggagaccgtgtgtcccggtagaacagcaacaacagtcagttaaaacatga
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