KEGG   Cannabis sativa (hemp): 115719330
Entry
115719330         CDS       T08987                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03030  DNA replication
csav03410  Base excision repair
csav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115719330
   03410 Base excision repair
    115719330
   03420 Nucleotide excision repair
    115719330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csav03032]
    115719330
   03400 DNA repair and recombination proteins [BR:csav03400]
    115719330
Enzymes [BR:csav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     115719330
DNA replication proteins [BR:csav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    115719330
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      115719330
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 115719330
NCBI-ProteinID: XP_030504178
LinkDB
Position
2:201808..219491
AA seq 2213 aa
MNGGGGGRKWDRNDFRNSKKQKFIRSAEEELEAKLGFDIFSEGDKRLGWLLTFASSSSED
QDTRKVYSCVDLYFVSQDGSTFKSKYKFRPYFYAGTKEKMEMDVEAYLRRRYESQIADIE
IVDKEDLDLKNHLSGLCKSYLKLSFDTVQQLMSVKRDLLHVVERNQAKSDATEAYELILT
GKREKRSQDFLDYIVDLREYDVPYHVRFAIDNDVRCGQWYDVSISSNDVMVERRTDLLQR
AEVRVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKP
EFEGHFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFLERRAAHHGFKLSDE
VGFQCDKIQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RYAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQAESEKFHNNRLLESETYIGGHVECLESGVFRSDLLTSFKLDPSG
YQQLIDNLDRDLQYAIRVEGKMDLDSVSNYAEVRSSILEKLESLRDDPIRDECPLIYHLD
VAAMYPNIILTNRLQPSSIVTDEICTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHM
KKQIESEFVDGSDSQLAKSFLDLPKTEQQLRLKDRLKKYCQKAYKRVLDKTVTEVREAGI
CMRENAFYVDTVRSFRDRRYEYKGLNKAWKGKLSEAKATGNSIKIQEAQDMVVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARILVEKIGKPLELDTDGIWC
ALPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVAENNTNDQYQTLTDPLAKSYTTHSEC
SIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGSTLVECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYG
GQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMK
FYVRKWCKISDVDIRSIIDWSYYKQRLSSSIQKIVTIPAAMQKVANPVPRVIHPDWLHKK
VREKDDKFRQQKLADVFSSFNKGELLKRKDEAVGVSSVIEEEVVGDLEDFQINKSSVKGP
RPVVRSYEVNNKSNSDENVAQECPHQADDNEKEQQIQDSSTSEIIDKNVDYQGWLEMKKR
KWKDTLNKRKKQRLGNATRHNASGLSELLSQPSNKEAQEGTGVSSYFKRHEVAIKRCHWQ
IVQVVPASQLGQYFAWVVVEGVMLKIPITVPRVFYINSKAPLEDKFPGRRANKILPHGKH
NYNLYEVVIDEAQFKAERKNLTALLADPEVEGIYETKVPLDLNAIVQIGCVCKVDKAAKK
RNIQDSWNISELHTKTTTECSYLEQSISFFYLYHSISEGRAIFVVYFPSSKTMSIVVVNP
YQNKDLSPSFLEKQFRDACQALSVQPPPPSNEFIFKVEYVGSVKDADKILQRTINQHRHE
HHGPIIAVIECPNAQSMKSSVRALDDFPCVSIPSNARDSNYQVLGWQQVAAKIGMQRCAA
SSQWLNERISLSRYAHVPLGNFELDWLIHTADVIFSRALRDQQQVLWISDDGIPDLGGVS
EEDTCFADEVHQPVLTYPGAYRKVTLELKIHHLAVDALLKSNQINEMEGGSLLGFESDMN
SGAHNSNDHSGFDEGTSCAPAFRVLKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHS
KLHDPALHRLLHKVMKKVFALLLAEFRKLGASIVFANFSKIIIDTGKPDISAAKAYCDSL
LKTLQTRDLFEWIELEPLQFWHSLLFMDQHNYGGIPAKADENMHEESEVDIVSSWNIAEN
LPKKIQDYFIFIVSQYLYIPWTYAKKQAAIRASAQDGSSSTPSITIAAAENFESHLTEYL
KGQISTYFTEKLLGIVRDTVLHMKELSKSEKEASVSAGMPQLSSNAHRGDAALEFIKHVC
AVLALDQSVQHNVLIMRKNLLKYVRVREFAPEAEFCDVFSSFILPNVICSYCNDCRDLDL
CRDTALLAQEWRCAVPQCGQPYNREVMENSLLQIVRQRERLYHVQDLVCQRCRQVKAAHL
AEQCGCAGSYRCKEDVTEFNRKMQIFLNIAIRQKFQLLQECTSWILGIHDVQD
NT seq 6642 nt   +upstreamnt  +downstreamnt
atgaacggcggcggtggtggtcggaaatgggaccgcaatgactttcgcaactcaaagaag
cagaagttcattcgttccgccgaggaagagctcgaggctaaattagggttcgatatcttc
tctgaaggtgacaagaggctcggatggttgcttacatttgcctcatcatcttcggaagat
caagatacccgcaaagtatatagttgtgttgatttgtattttgtatcacaggatggttct
actttcaaatctaaatacaagttccgtccttatttctatgccggcactaaggaaaaaatg
gaaatggacgttgaagcatatttgagacggcgctatgaaagtcaaattgctgatattgaa
atcgtggataaggaagatcttgatcttaaaaatcatttgtctggtttatgcaagtcctat
ctaaaactatcattcgacactgttcagcaactaatgagtgttaagagagatctattgcac
gttgttgaaagaaaccaggcaaaatctgatgctacagaagcttatgagttaatattgaca
gggaaaagagaaaaaaggtctcaagattttttggattacattgttgacctccgagagtac
gatgttccttaccatgttcggtttgccattgacaatgatgtacgctgtggacagtggtac
gatgttagtatatctagtaatgatgttatggtggagaggagaacagatcttctacagcgt
gctgaagttcgtgtttgtgcattcgatattgaaaccaccaagcttcccctcaaatttcca
gatgctgagtatgatttagtaatgatgatttcgtacatggttgacggacaagggtatctg
ataataaacagagagtgtgttggtgatgatatagaggatttggaatacactccaaaacca
gaatttgaagggcatttcaaggttacaaatgtaaaaaacgagctagagcttcttaaattg
tggttctcccatatgcgggaggtgaagcctggtatatatgtcacgtacaatggtgatttt
tttgattggcctttcctggaaagaagagcagcccatcatggatttaaacttagtgatgag
gttggatttcaatgtgacaagattcaaggagaatgtcgtgctaaatttgcttgccatctt
gattgctttgcttgggtcaagcgtgatagttatctccctcagggaagccagggccttaag
gctgtaacaaaggcaaagttgggatatgatcccctggaagtgaatcctgaggatatggtt
cgttatgcaatggaaaagccacagatgatggcctcatattctgtttccgatgctgtttca
acttattacttgtatatgacctatgttcatccattcattttctctcttgcgacaattatt
ccgatgtcaccagatgaggtcttgcgcaagggtagtgggaccctctgtgaaatgcttcta
atggtccaggcatacaaggcaaatgttatttgccccaacaagcaccaagctgaatcagag
aagtttcataataaccgtcttcttgaaagtgagacatatataggtggtcacgtggaatgc
cttgaaagtggagtttttagatccgatcttttaactagttttaagctcgatccatctgga
tatcagcaactgattgacaaccttgatcgtgatctgcaatatgccattagagttgagggt
aagatggacttggattccgtttctaattatgctgaagtgaggagttctatcttagaaaag
cttgaaagtttacgagatgaccccatacgagatgaatgcccccttatttatcatctagat
gtagctgcaatgtacccaaatattattttgacaaacaggcttcagccatcatcaatagtt
acagacgagatttgcactgcttgtgatttcaatcgcccaggaaagacttgtcttcggaaa
cttgaatgggtttggcgtggagaagtcttcatggcaaagaaaagtgactactaccatatg
aagaagcaaattgagtcagagtttgttgatggatctgatagccagttagcaaaatctttt
cttgacctacctaagacagaacaacaattgagactgaaagatcgtctaaagaaatattgt
cagaaggcatataaacgggtactggataagacagttactgaagttcgggaagcggggata
tgcatgagggagaatgcattctacgttgacactgttcgcagctttcgagatagaagatac
gagtacaaaggacttaataaggcctggaaaggaaaattgtctgaagccaaagctactgga
aattctattaaaatccaagaggcacaggatatggtagtcctttatgattcgttacaactt
gctcataagtgcattcttaattccttttatggatatgtcatgcgcaagggtgcacgatgg
tactctatggaaatggctggagtggttacatatactggggctaaaattattcagaatgct
cgcatactggttgaaaagattggaaagccacttgagttagatacagatggtatctggtgt
gcacttcctggatcttttccagagaactttactttcaaaacaaaggacttgaagaagaag
ctgactatctcgtatccatgtgttatgttgaatgttgatgtggcagaaaacaatacaaat
gatcagtaccagaccttgacagatcccttggccaaatcttatacaactcatagtgaatgc
tcaattgaatttgaagtggatgggccatacaaggcaatgattattccagcttcaaaagaa
gagggaattttgattaagaagcgatatgcagttttcaatgatgatgggacccttgctgaa
cttaaaggttttgaaattaagcgtagaggagagctgaagctcatcaaagttttccaggct
gagctttttgacaagtttctccatggttcaacgttagtggaatgctattcagctgttgct
tctgtggccaaccgttggcttgatctactcgataatcaaggaaaggatattgcagacagc
gagttgctcgattatatatctgaatcaagtaccatgagcaagtctctagcagactatggt
gggcagaagtcatgtgcagtgaccactgcaaaacgtcttgctgattttcttggtgataca
atggtcaaagataaagggcttcgttgtcagtatattgttgcatgtgaacctaagggaaca
cccgtgagcgaacgtgctgttcctgttgcaatttttgaaacagatgccgaaataatgaaa
ttttatgtgcggaagtggtgcaagatatcggatgttgacattcgatccatcattgactgg
tcatactacaagcagcggcttagttcatcgattcagaaaattgtcactattccagctgca
atgcaaaaggttgcaaatcctgtccctagagtgattcatcctgattggttgcataagaag
gttcgcgagaaggatgataaatttcgacagcaaaagctagctgatgtctttagttcattt
aataagggtgaactgttaaaaaggaaggatgaggctgtaggagttagtagtgtaattgag
gaagaggttgttggagatcttgaagacttccaaataaataagagttctgtaaagggaccc
agaccagtagttcgaagttatgaagttaataataagagcaattcagatgagaatgtagca
caagaatgtccgcatcaagctgatgataatgaaaaagagcagcaaatacaagattcctcc
acttctgagattattgacaaaaatgtcgactaccaaggatggcttgaaatgaagaagaga
aaatggaaagatactctcaacaagaggaagaagcaaagactaggcaatgcaacacggcac
aatgctagtggtctttctgagctgctcagtcaaccgtcaaataaagaagctcaggaggga
acaggagttagttcatactttaagagacatgaagtagctataaagcgatgccactggcag
atagtacaagtagttccagcttctcagcttggccagtattttgcttgggttgtggtagaa
ggagtgatgcttaagattcctataactgttcctagagtgttttacatcaattccaaggcc
cctttagaagacaaatttccaggaaggcgtgccaacaaaattcttccacatggaaagcat
aattataacctatatgaggttgtaattgatgaagctcagttcaaagcagaaagaaaaaac
cttactgcacttcttgcagatccagaagttgagggaatatatgaaacaaaggtaccattg
gacttgaatgcgattgttcagattggatgtgtctgtaaggtggataaagctgctaagaag
cgaaatatccaagactcctggaatattagcgaactacatacgaagactacaacagaatgt
tcttatttggagcaatctatatctttcttctacttgtatcatagtatttctgaagggcgt
gctatatttgttgtttattttccttcttcaaaaacaatgtccattgtcgtcgtgaatcct
tatcaaaacaaggatctgtcaccatcctttcttgagaagcaattccgtgatgcttgccag
gcgttatctgttcaaccacctcctcctagtaatgaattcatattcaaggtggagtatgtt
ggatctgtaaaggatgctgataagattctgcaaagaacaataaatcagcacagacatgaa
catcatggaccaataattgctgttattgaatgcccaaatgctcaatcaatgaagtcaagt
gtacgagctttagatgatttcccatgtgtgagcattccctccaatgctcgtgatagtaac
tatcaggttcttgggtggcaacaagttgctgcaaaaattggaatgcaacggtgtgctgcg
tcatctcaatggttgaatgaaagaatttctctctctagatatgcccatgtgccgctaggg
aattttgaacttgattggctcatacatactgcagatgtcatcttttcaagagcactccgt
gatcagcaacaggtactttggatatctgatgatgggattccggatctaggaggcgttagt
gaagaagatacttgttttgctgatgaggtccatcaacctgttcttacataccctggagca
tatagaaaagtcaccttggagttaaagattcatcatctagctgtagatgctcttctcaaa
agcaaccaaataaatgaaatggaaggaggttctttattggggttcgaatcagatatgaat
tccggagcacataattcaaatgatcacagtggctttgatgagggtacctcatgtgctcct
gcatttcgtgttttaaaacagttgattcaaaggtgccttacggatgcagttacatcggga
aacgtgtttgcagatgcaatattacagcatctataccggtggctatgcagtcctcattcc
aaacttcatgatccggctcttcaccgtctacttcataaggtcatgaaaaaggtatttgct
ctattattggccgagtttcggaaattgggtgctagtatcgtatttgcaaatttttccaag
attatcatagacaccggcaaacctgatatctctgctgccaaagcttactgtgatagctta
cttaagaccctgcaaactagagacctatttgagtggattgaacttgaaccattgcagttc
tggcattccttgctttttatggatcagcataattatggtggaatccctgcaaaagctgat
gaaaacatgcatgaagagtctgaagttgatattgtgtcaagctggaatattgctgaaaat
ttaccaaagaaaattcaggattattttattttcattgtttctcaatacctttatatccct
tggacttatgcaaaaaaacaagctgcaattagagcatctgcacaagatggcagctcaagc
acaccatcaattactattgcagcagctgagaatttcgagtctcatctaacggaatatctt
aaaggccagatcagcacttacttcactgaaaaacttttgggaatcgtgcgagataccgtt
cttcatatgaaagaactaagtaaatcagaaaaagaagcatctgtatctgcagggatgcca
caactctctagtaatgcccacagaggggatgcagcactggaatttattaagcatgtttgt
gcagtactggctcttgatcagagtgttcagcacaatgttctgataatgagaaagaatctg
ctaaaatatgtgcgagttagggagttcgctcccgaagctgaattttgtgatgtcttttcg
tccttcatcttgccaaatgtcatttgcagctactgcaatgactgtagagacctggatttg
tgtcgagacacggccctcctggctcaggagtggcgatgtgctgtgccacaatgcgggcag
ccctacaaccgtgaggtaatggaaaattccctgcttcagatcgtacgacagagagaacgc
ctctaccacgtgcaggatctcgtgtgccaaaggtgtagacaggtgaaggcagcacattta
gcagagcaatgtgggtgtgccgggtcatacagatgcaaggaagatgtaaccgagttcaac
agaaaaatgcaaatattcttaaacattgccattcgccagaaatttcaacttctccaagaa
tgcacatcatggatattgggaatccatgatgtacaagattag

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