Cannabis sativa (hemp): 115719343
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Entry
115719343 CDS
T08987
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115719343
03400 DNA repair and recombination proteins [BR:
csav03400
]
115719343
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115719343
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115719343
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115719343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
ResIII
UBA
Motif
Other DBs
NCBI-GeneID:
115719343
NCBI-ProteinID:
XP_030504192
LinkDB
All DBs
Position
2:complement(69080653..69087732)
Genome browser
AA seq
882 aa
AA seq
DB search
MNGNSISSEEDVVSKLIEMGFENSIAVEAVKLVGPSVDDAVEHILNGCRRNSHRTTSNST
SSENNVKALGKRTMYSSCVSGQKRQSSILEHFQSTSRNKRRETEVVEQSKPPISDDSYCI
KTATSEAFLDDCSDEMVIGPGWEHKVNSLLQKHFGNFSLKKFQKEALAAWLANEDCLVLA
ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVETK
AMRGVYSIVYICPETVLRLIKPLQTLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVL
REKFSASNLKFLKFSIPLMALTATATIQVREDILKSLSMTKETKIVLTSFFRPNLRFSVK
HSRTSSPLSYEKDFHELIDLYARKGKPGEKKQMIFPQEFSGSFVSILEADSISDNDLTDV
EDGYSDRDDETNSTEHNSAKGKQMSIEYLENEVDVFQSVDDWDVACGEFSAEAPHVDCDL
NGVSESGDTPNRVDKRDQLLKENVEQGPTIIYVPTRKDTLKIAKYLCGYGVKAAAYNAGL
PKKHLRQVHMEFQENTIEVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRD
GKLADCILIANLSRIPSLLPSKRTAEQTRQAYKMLSDCFRYGMNLSCCRAKKLVEYFGEK
FADEKCLLCDVCVNGPPEVQDLREEADILMQVIAAYNGSRTFDDASYFDDASTQQRFRGK
PDLRMFVSEIRLQSQKFMATDLLWWRGLARIMESKGLIREGDDKNHVQITMPEPTELGLE
FLQYKEDQTFCAHPEADMLVSMRKTESYSSFSDWGKGWADPEIRHQRLERMQPKTKQRKA
KGLRGSRKRGKRKSNKHTPDMTTARGRIAAKFTKANGKPFRS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaatagtatttcttccgaagaagatgttgtctcaaaacttattgaaatgggg
tttgagaattccattgctgtagaagctgtgaaattagttggtccatccgttgatgatgca
gttgaacatatcttgaacggatgtcgtagaaacagtcataggacaacaagtaattctacc
agctctgagaacaatgtcaaggctttggggaaaagaaccatgtattcctcttgtgtctct
ggtcagaagcgacaatctagcatactagaacatttccaatccactagcagaaacaagaga
agggaaactgaagttgtggaacaaagcaagccacctatttcagatgatagttattgtatc
aagactgctacatcagaagcatttctagatgattgctcagatgagatggtcattggacca
ggttgggaacataaagtgaacagtttattgcaaaagcatttcggtaatttttcgttaaaa
aaatttcagaaagaagcattggctgcatggctagctaatgaagactgccttgttcttgct
gcaacaggatctgggaaatctttgtgttttcagattccagcattattgactgggaaggtt
gtggttgtaatatcaccattgataagcttgatgcatgatcagtgcttaaaactagcaaaa
catggcgtctctgcttgctttcttggctctggccagcctgatagttctgttgaaactaaa
gctatgagaggcgtgtatagcatagtgtatatctgtcctgagacagttttaagactgatc
aaaccacttcagacattagcagaaaatcgtgggattgctttatttgctatagatgaagta
cattgtgtttctaagtggggtcatgattttcggccagactacaggagattgtctgtcctg
cgagagaagttcagtgcaagcaacttaaagttcctaaaattcagtataccgctgatggca
ttaactgctactgccacaatacaggttcgagaagacattctcaagtcattgtccatgaca
aaagaaacaaagattgtccttacctcgttttttcgaccaaacctgaggttttcagtaaag
catagtagaacctcttcaccattatcttatgagaaagatttccatgagttgattgaccta
tatgcgagaaagggaaaacctggagaaaagaaacaaatgatattcccacaagaatttagt
ggttcatttgttagcatattggaggcagattccatttctgacaatgatttaactgatgtt
gaggatggttattctgatagagatgatgaaacaaattcaacagagcataatagtgcaaag
ggaaaacaaatgtcaattgagtacctggaaaatgaggtggatgttttccagagtgtggat
gattgggatgttgcatgtggtgagttttccgcagaagctcctcatgtagactgtgatctc
aatggtgtatctgagtccggggataccccaaatagagtggacaaaagagatcaacttctt
aaagagaatgtagaacaaggaccaactatcatatatgttcccactaggaaagataccctg
aaaattgccaagtatctatgtggatatggtgtgaaggctgctgcctataatgcagggttg
ccaaaaaagcatctgaggcaggtccacatggaatttcaagaaaacacaatagaggttgtt
gtagcaacaattgcttttggtatggggattgacaagttaaatgttcgaaggattattcac
tatggttggccacagagcctggaagcatactatcaagaagctggtcgtgctggaagagac
ggaaagttagcagattgtatactgattgcaaacttatcaagaataccgtcacttttgcct
agtaagaggactgcagagcagacaaggcaagcatacaagatgttgtctgattgtttcagg
tatggaatgaatttgtcatgctgtcgggctaagaagctcgtggagtactttggagagaaa
tttgctgatgagaagtgtctcttgtgcgatgtgtgcgttaatggacctcccgaagtacag
gatttgagagaggaggcagacatcttgatgcaggtcattgctgcctataatggaagtaga
acttttgacgatgcctcatactttgacgatgcaagtacacaacaacgattcaggggaaag
ccagatctcaggatgtttgtcagtgaaattaggttacagtctcaaaaattcatggcaact
gatctgctctggtggcgaggtcttgctcgaattatggaaagtaaagggttaattagagag
ggagatgacaagaaccatgttcagattacaatgccagagccaacagagcttggtcttgag
tttctgcaatacaaggaagaccaaactttttgtgctcacccagaggcagatatgcttgta
tccatgaggaagactgaatcttattcgagtttctcagactggggaaaaggctgggctgac
cctgagattcgacatcaacgtttggagaggatgcaacccaagacaaagcagagaaaagca
aaggggttaagagggtcaagaaaaagggggaaaagaaaatcaaataagcatactcctgat
atgactactgctagaggtagaatagcagcaaaattcaccaaagcaaatggtaagccattt
cggtcttag
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